Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq758 118 8e-22 seq7002 109 4e-19 seq3 102 6e-17 seq7446 98.7 8e-16 seq6668 98.7 8e-16 seq1225 95.1 1e-14 seq1299 91.5 1e-13 seq1470 89.7 4e-13 seq547 82.4 6e-11 >seq758 Length=2790677 Score = 118 bits (130), Expect = 8e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 ||||| || ||||| || || ||||| || | | ||| | | |||| |||| ||||| Sbjct 2565187 AGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTG 2565128 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 |||||||| || | | ||| || ||||| ||||||||||| ||||| || ||||| Sbjct 2565127 CCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCC 2565068 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 || ||| |||| | |||||| | ||||| ||||| |||| || |||||||| | Sbjct 2565067 TTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGG 2565008 Query 101450 GTTTTTACAAATATCTGCAT 101469 || || || || |||||||| Sbjct 2565007 GTCTTCACGAAGATCTGCAT 2564988 Score = 105 bits (116), Expect = 5e-18 Identities = 146/203 (72%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || || || || || ||||| || | | ||| | | |||| |||| ||| Sbjct 2565646 TGCAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 2565587 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || |||||||| || | | ||| || ||||| || |||||||||||||| || || || Sbjct 2565586 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGGATCTTG 2565527 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| |||| | |||||| | ||||| || || |||| || |||||||| Sbjct 2565526 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC-TCCAGGGTGATGGTCTTGCCGGTC 2565468 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || || |||||||| Sbjct 2565467 AGGGTTTTCACGAAGATCTGCAT 2565445 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/203 (70%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || |||| | | || ||||| || | | ||| | | |||| |||| ||| Sbjct 2565417 TGCAGGGTCGACTCTTCTGG-ATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 2565359 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGG-AATGCCTTCTTTATCTTGAATTTT 101385 || |||||||| || | | ||| || ||||| || ||||||||| ||||| || ||||| Sbjct 2565358 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGAATGCCTTCCTTATCCTGGATTTT 2565299 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| |||| | ||||| || | | ||||| |||| || ||||||| Sbjct 2565298 GGCCTTCACATTTTCGATGGTGTC--ACTGGGCACCCTCAAGGGTGATGGTCTTGCCGG- 2565242 Query 101446 TAAAGTTTTTACAAATATCTGCA 101468 | | || || || || ||||||| Sbjct 2565241 TCAGGTCTTCACGAAGATCTGCA 2565219 >seq7002 Length=12659153 Score = 109 bits (120), Expect = 4e-19 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | || ||| | | |||| |||| || Sbjct 9467065 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGT 9467124 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||||||||| |||||| || || || || || || || || ||||||||||| Sbjct 9467125 TTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 9467184 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | |||||| | || || | || |||| |||||||| || Sbjct 9467185 GCTTTGACATTCTC-ATGGTGTCACTGGGCTCGACCTTGAGGGTGATGGTTTTGCCCGTG 9467243 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACG 101476 | || || ||||| ||||||||| || || Sbjct 9467244 AGGGTCTTCACAAAGATCTGCATGTTTGCG 9467273 >seq3 Length=16319837 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || ||||| || || ||||| || | | || | |||| |||| ||| Sbjct 4626394 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 4626335 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| |||| | ||| || ||||| ||||||||||| |||||||| || ||| Sbjct 4626334 TTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTT 4626275 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 4626274 GCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTC 4626215 Query 101447 AAAGTTTTTACAAATATCTGCATGGT 101472 | || || || || |||||||| || Sbjct 4626214 AGGGTCTTCACGAAGATCTGCATTGT 4626189 >seq7446 Length=17224310 Score = 98.7 bits (108), Expect = 8e-16 Identities = 148/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || |||| | || ||||| || | || ||| | | |||| |||| || Sbjct 13346911 TGCAGGGTGGACTCTT---GGATGTTGTAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGT 13346967 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || | |||||||||| |||||| || || || || || || || || ||||||||||| Sbjct 13346968 TTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 13347027 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || | || | |||||| | || || ||||| |||| |||||||| | Sbjct 13347028 GCTTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGGG 13347087 Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACG 101476 | || || ||||| ||||||||| || || Sbjct 13347088 AGGGTCTTCACAAAGATCTGCATGTTTGCG 13347117 >seq6668 Length=25972781 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||||| || ||||| || ||| | || | | ||| | | || |||| ||| Sbjct 3822651 ATGAAGGGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCGTCTTCCAGTTG 3822592 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| |||| | || ||||| || ||||| ||||| ||||| || || || Sbjct 3822591 CTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 3822532 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 |||||| ||||| | || || || | ||| | ||||| |||| || || || | Sbjct 3822531 GGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAATCTCAAGGGTGATAGTCTTCCCCCT 3822472 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 || ||||| || || |||||||| Sbjct 3822471 TAGGGTTTTCACGAAAATCTGCAT 3822448 >seq1225 Length=21025059 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| ||||||||||| || ||||| |||| | || ||||| || ||||| ||||| | Sbjct 9810188 CATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCT 9810129 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 |||| || || || |||||| ||||| |||| | | ||| || ||||| |||| Sbjct 9810128 TATCCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGA 9810069 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | ||||| ||||| |||||||| Sbjct 9810068 TGGTCTTCCCTGTAAGGGTTTTCACAAAAATCTGCAT 9810032 >seq1299 Length=15376 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/203 (71%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 ||||| || ||||| || || ||||| | | || ||| | | |||| |||| || || Sbjct 1925 AGGGTGGACTCTTTCTGGATGTTGTAGCCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTC 1866 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATG-CCTTCTTTATCTTGAATTTTTTG 101388 || |||| ||||| |||||| || || || || || || || || ||||||||||| Sbjct 1865 CCAGCAAGTATCAGACGCTGCTGGTCAGGTGGGATATCCCTCCTTGTCTTGAATTTTGGC 1806 Query 101389 TTTTACAATTTCTACA--GTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| ||||| | |||||| | || | ||||| |||| || ||||| || Sbjct 1805 TTTGACA--TTCTAAATGGTGTCACTGGGCTCAATCTCAAGGGTGATGGTCTTGCCCGTG 1748 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 1747 AGGGTCTTCACAAAGATCTGCAT 1725 >seq1470 Length=5179915 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101272 GGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACC 101331 ||| || | |||||| || ||||| || | || ||| | | |||| |||| ||||| || Sbjct 4406614 GGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGCAGCCATCCTCCAGCTGCTTGCC 4406673 Query 101332 TGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTT 101391 |||||||||| |||||| || || || || || || ||||| ||||||||||| ||| Sbjct 4406674 AGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCTTTGTCTTGAATTTTGGCTTT 4406733 Query 101392 TACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGT 101451 | | | || |||| | | || || ||||| ||| || ||||| || | || Sbjct 4406734 GAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGATGATGGTCTTGCCCGTGAGGGT 4406793 Query 101452 TTTTACAAATATCTGCA 101468 | ||||| | ||||| Sbjct 4406794 CTCCACAAAGAGCTGCA 4406810 >seq547 Length=9034655 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| || |||| || | ||| || | || ||||| | |||| |||| || Sbjct 8022850 TGCAGGGTGGACTCTTCCCAGATGTCGTAGTCTGAGAGAGTTCGGCCATCCTCCAGCTGT 8022791 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || |||| ||||| | |||| || || || || || || || || ||||||||||| Sbjct 8022790 TTGCCGGCAAGTATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 8022731 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| || |||||| | | || |||||||||| || ||||| || Sbjct 8022730 GCTTTGACATCCTCATTGGTGTCACTGGGCTTGACCTCAAGAGTGATGGTCTTGCCCGTA 8022671 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || ||||| |||||||| Sbjct 8022670 AGGGTCTTCACAAAGATCTGCAT 8022648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396231393084681