Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq37 84.2 6e-11 >seq37 Length=10148950 Score = 84.2 bits (92), Expect = 6e-11 Identities = 356/553 (64%), Gaps = 12/553 (2%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || ||||| || || || | || || |||||||||||||| || | ||| | Sbjct 6163909 TTTGTCATCTTCCCCATCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCT 6163850 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195 | || ||||| | || || || ||||| ||| ||||||||| ||| Sbjct 6163849 TCCTTCTGGACCGCCGAGGAGGTGGACCCGTCCAAGGACATTTGGCACTGGGAATTCCTG 6163790 Query 133196 ACTGGGGATGAAAAACATTTTAT-TTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254 | || || | | ||||||| | | ||| || | | || ||||| || |||||||| Sbjct 6163789 AAGCCCGAGGAGAGATATTTTATATCCCATG-TTCTGGTTTTCTTTGC-GCAAGTGATGG 6163732 Query 133255 TATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCG 133314 || || || ||| || | || | || ||||||||| || | |||||||| Sbjct 6163731 CATAGTAAATGCAAACTTGGTGGAGCGATGTAGCCAAGAAGTTCAGGTGACAGAAGCCCG 6163672 Query 133315 TGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCT 133374 || | ||| | || ||||| |||||||| || |||||| | ||| | || Sbjct 6163671 CTGTTTCTGTGGCTTCCAAATTGCCATGGAAAACATACATTCTGGAATGTATAGTTTCCT 6163612 Query 133375 AATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--AGC 133432 ||||| |||||||| |||||| || | | | | | ||||| |||||| | | Sbjct 6163611 TATTGACACTTACATAAAAGATCCCAAAGAAAGGGAATTTCGCTTCAATGCCATTGAAAC 6163552 Query 133433 GAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGT 133492 || | |||||| | || ||||| | || ||||| | | ||||| |||||| Sbjct 6163551 GA--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGCA 6163494 Query 133493 GCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGT 133552 || | | || ||| | || | ||||||| || || ||||| |||| |||| Sbjct 6163493 GCTACCTATGGGGAACGTGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTTTT---CTGGT 6163437 Query 133553 GCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTC 133611 || ||| || || || ||||| || || || || | | ||||| || ||||| Sbjct 6163436 -TATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACCTTTTC 6163378 Query 133612 TAACGAACTTATT 133624 || ||||||||| Sbjct 6163377 CAATGAACTTATT 6163365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471634058366021