Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macaca_20nemestrina_20[refseq_20GCF_5F000956065.1_202015-03-19] 9,733 sequences; 2,948,703,511 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq148 214 1e-50 seq170 205 8e-48 seq3558 183 3e-41 seq2492 129 5e-25 seq2359 122 7e-23 seq3280 116 3e-21 seq1414 116 3e-21 seq6113 113 4e-20 seq59 102 7e-17 seq2725 95.1 1e-14 seq2991 93.3 3e-14 seq2525 89.7 4e-13 >seq148 Length=5148307 Score = 214 bits (236), Expect = 1e-50 Identities = 379/548 (69%), Gaps = 10/548 (2%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || |||||||| || || || || | ||||| Sbjct 941676 CTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCATCGGCAAGAATGGGGACCTGCCC 941617 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACT 2256 ||||| || || | |||||||| | | |||| || | |||||| | | ||||| Sbjct 941616 TGGCCGCCGCTCAGGAATGAATTCAGATATTTCCAGAGAATGACCACAACCTCTTCAGTA 941557 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| | || |||||||| | ||||| ||||| || |||| | | | Sbjct 941556 GAAGGTAAACAGAATCTGGTGATTATGGGTAAGAAGACTTGGTTCTCCATTCC--TGAGA 941499 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | | ||||| || ||||| ||| | || ||||| ||| | || || || || | Sbjct 941498 AGAATCGACCTTTAAAGGGTAGAATTAATTTAGTACTCAGCAGAGAACTCAAGGAACCTC 941439 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTA-TAATAGGA 2433 ||| || ||||| ||| |||| | |||| | ||| | || | || ||| ||| | | Sbjct 941438 CACAAGGAGCTCATTTTCTTGCCAGAAGTCTGGATGATGCCTTAAAACTTACTAACA--A 941381 Query 2434 CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAG 2493 ||||||||| | | | || || | |||||||||| ||||||| || ||||| ||| || Sbjct 941380 CCAGAATTAGCAAATAAAGTAGACATGATTTGGATAGTTGGTGGCAGTTCTGTTTATAAG 941321 Query 2494 GAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTT 2553 || ||| | | || | | | || ||| | |||||||| ||||| | ||| Sbjct 941320 GAAGCCATGAATCACCCAGGCTATCTTAAACTATTTGTGACAAGGATCATGCAAGACTTT 941261 Query 2554 GAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTT 2613 ||| |||| || | | ||||||||| || | ||||| |||| || | |||| Sbjct 941260 GAAAGTGACACCTTTCTTCCAGAAATTGATTTGGAGAAATATAAACTTCTACCAGAATAC 941201 Query 2614 CCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATAT 2673 |||||||||| ||||| || ||||| || || || |||| ||||||||||| ||||| Sbjct 941200 CCAGGTGTTCTCTCTGATGTCCAAGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATAT 941141 Query 2674 Gaaaaaaa 2681 || || || Sbjct 941140 GAGAAGAA 941133 >seq170 Length=10713981 Score = 205 bits (226), Expect = 8e-48 Identities = 375/547 (69%), Gaps = 7/547 (1%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || |||||||| || || || || | ||||| Sbjct 4274958 CTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCATCGGCAAGAACGGGGACCTGCCC 4275017 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGAC---ATCTTCTTCCACT 2256 ||||| || || | |||||||| | | |||| || | |||||| | | ||||| Sbjct 4275018 TGGCCGCCGCTCAGGAATGAATTCAGATATTTCCAGAGAATGACCACAACCTCTTCAGTA 4275077 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| | || |||| ||| | ||||| ||||| || |||| | | | Sbjct 4275078 GAAGGTAAACAGAATCTGGTGATTACGGGTAAGAAGACTTGGTTCTCCATTCC--TGAGA 4275135 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | | ||||| || ||||| ||| | |||||||| ||| | || || || || | Sbjct 4275136 AGAATCGACCTTTAAAGGGTAGAATTAATTTAGTTCTCAGCAGAGAACTCAAGGAACCTC 4275195 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGAC 2434 ||| || ||||| ||| |||| | |||| | ||| | || | || ||| | || Sbjct 4275196 CACAAGGAGCTCATTTTCTTGCCAGAAGTCTGGATGATGCCTTAAAACTTACTGAACAAC 4275255 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 |||||||| | | | || || | |||||||||| ||||||| || ||||| ||| ||| Sbjct 4275256 CAGAATTAGCAAATAAAGTAGACATGATTTGGATAGTTGGTGGCAGTTCTGTTTATAAGG 4275315 Query 2495 AGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTG 2554 | ||| | | || | | | || ||| | | |||||| ||||| | |||| Sbjct 4275316 AAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGATAAGGATCATGCAAGACTTTG 4275375 Query 2555 AATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTC 2614 || |||| || | | ||||||||| || | ||||| |||| || | |||| | Sbjct 4275376 AAAGTGACACCTTTCTTCCAGAAATTGATTTGGAGAAATATAAACTTCTACCAGAATACC 4275435 Query 2615 CAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATG 2674 ||||||||| ||||| || ||||| || || || |||| ||||||||||| |||||| Sbjct 4275436 CAGGTGTTCTCTCTGATGTCCAAGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATG 4275495 Query 2675 aaaaaaa 2681 | || || Sbjct 4275496 AGAAGAA 4275502 >seq3558 Length=16468325 Score = 183 bits (202), Expect = 3e-41 Identities = 187/243 (77%), Gaps = 1/243 (0%) Strand=Plus/Minus Query 1270 aaaCGCCACAAGAAGTTGTCATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAA 1329 ||| ||| || ||||| | ||||| |||||||| ||| ||||| ||||||||||| Sbjct 14725880 AAATGCC-CAGGAAGTCCTGATTGTGACATGGCAGAAAAAGAAAGCTGTAAGCCCAGAAA 14725822 Query 1330 ACATGGCCACTTTTAGTAATGACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAA 1389 |||||| ||| || || | |||| ||||| || | ||||| || || || || || | Sbjct 14725821 ACATGGTCACCTTCAGCGAGAACCATGGGGTGGTGATCCAGCCTGCCTATAAGGACAAGA 14725762 Query 1390 TGAACATAACTGAGCTTGGACTACAAAACACAACTATAACCTTCTGGAACACAACATTGG 1449 | ||||| || |||| ||||| ||||||||||| || ||||||||||| | || ||| Sbjct 14725761 TAAACATTACCCAGCTGGGACTCCAAAACACAACCATCACCTTCTGGAATATCACCCTGG 14725702 Query 1450 ATGATGAAGGGTGCTACAAGTGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAA 1509 | ||||||||||| |||| |||| | || || || ||||| ||||||||||| ||||||| Sbjct 14725701 AGGATGAAGGGTGTTACATGTGTCTCTTCAATACCTTTGGTTCTGGGAAGATCTCAGGAA 14725642 Query 1510 TAG 1512 || Sbjct 14725641 CAG 14725639 >seq2492 Length=193818 Score = 129 bits (142), Expect = 5e-25 Identities = 366/552 (66%), Gaps = 18/552 (3%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| | | || ||||||||||| || || || | ||||| Sbjct 46180 CTAAACTGCATCGTCGCTGTGCCCCAGAACATGGGCATTGGCAAGAACGGGCATCTGCCC 46239 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCT-TCCACT-G 2257 ||||| || || | |||||||||| ||| || | ||||||| || | |||| Sbjct 46240 TGGCCGCCACTCAGGAATGAATTTAGGTGTTTCCAGAGAATGACACAAACTCTTCACTAA 46299 Query 2258 ACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAA 2317 | ||||||||| || ||||| | || |||| |||| || |||| | | || Sbjct 46300 AAGGTAAACAGAAT-CTGATGTTATGTGTAGGAAGATCCGGTTCTCCATTCC--TGAGAA 46356 Query 2318 GCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACC 2375 | | | ||||| || | |||| ||| | |||||||| ||| | || || | || || Sbjct 46357 GAATCGACCTTTAAAGGATGGAATTAATTTAGTTCTCAGCAGAGAACTCAAGGGACCTCC 46416 Query 2376 ACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGAC 2434 || || ||||| | | |||| | || | | ||| | ||| ||| ||| | || Sbjct 46417 ACAAGGAGCTCATTCTCTTGCCAGAATTCTGGATGA-TATCTTAAAACTTACTGAACAAC 46475 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 |||||||| || | | || || | |||||||||| |||||||||| | ||| ||| ||| Sbjct 46476 CAGAATTAGAAAATAAAGTAGAGATGATTTGGATAGTTGGTGGAAGTTTTGTTTATAAGG 46535 Query 2495 AGAGCATTACAAGATCTTGCAAA----CAGATGCTGTTTTTAACAAGGATTCTGCAAAAA 2550 | ||| | ||| |||| | | || ||| | ||||||| || | | Sbjct 46536 AAGCCATGA----ATCACCCAAACCATCTTAAACTATTTGTGACAAGGAACATGTAGGAC 46591 Query 2551 TTTGAATGTGATAC-ATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGA 2609 |||||| ||| || | || ||||||||| || | ||||| |||| || | || Sbjct 46592 TTTGAAAATGACACTTTTTTTTCCAGAAATTCATTTGGAGAAATATAAACTTCTGCCAGA 46651 Query 2610 ATTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGAT 2669 || ||||||||| ||||| || || || || || | |||| ||||||||| | Sbjct 46652 ATACCCAGGTGTTTTCTCTGATGTCCAGGAGGAGAAAGACATTAAGCTCAAATTTGAAGT 46711 Query 2670 ATATGaaaaaaa 2681 |||||| || || Sbjct 46712 ATATGAGAAGAA 46723 >seq2359 Length=194547 Score = 122 bits (134), Expect = 7e-23 Identities = 359/546 (66%), Gaps = 7/546 (1%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || ||||||||||| || || || | ||||| Sbjct 63607 CTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCATTGGCAAGAACGGGGACCTGCCC 63548 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAA--ATGACATCTTCTTCCACTG 2257 ||||| || || | |||||||||| |||| || | | | ||| ||||| | Sbjct 63547 TGGCCGCCGCTCAGGAATGAATTTAGGTATTTCCAGAGAGTAACACAAACTCTTCAGTAG 63488 Query 2258 ACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTT-TTCACTTCCCATTAAA 2316 | |||||||| | || ||||| | || |||| ||||| | || ||| | | | Sbjct 63487 AAGGTGAACAGAATCTGGT-GTTATGTGTAGGAAGATCTGGTTCTCCATTTCTGAGAAGA 63429 Query 2317 AGCAGGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCA 2376 | | | |||| || | ||||| ||| | ||||||| ||| | || || || | | | Sbjct 63428 ATC-GATCTTTAAAGGATAGAATTAATTTAATTCTCAGCAGAGAACTCAAGGAACTTCTA 63370 Query 2377 CGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGACC 2435 | | ||||| | | |||| | |||| | ||| | ||| ||| ||| | ||| Sbjct 63369 CAAGAAGCTCATTCTCTTGCCAGAAGTCTGGATGA-TATCTTCAAACTTACGGAACAACC 63311 Query 2436 AGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGA 2495 ||||||| | | | || || | ||||||||| ||||||| || ||||| || |||| Sbjct 63310 AGAATTAGCAAATAAAGTAGAGATAATTTGGATAGTTGGTGGCAGTTCTGTTTACAAGGA 63251 Query 2496 GAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGA 2555 ||| | | || | | | || ||| | |||||||| || | ||||| Sbjct 63250 AGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGACAAGGATCATGTGGGACTTTGA 63191 Query 2556 ATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCC 2615 | ||| || | || ||||||||| || | ||||| |||| || | |||| || Sbjct 63190 AAATGACACGTTTTTTCCAGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAATACCC 63131 Query 2616 AGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGa 2675 |||||||| ||||| || || || || || | |||| | ||||||||| ||||||| Sbjct 63130 AGGTGTTCTCTCTGATGTCCAGGAGGAGAAAGACATTAAGTTCAAATTTGAAGTATATGA 63071 Query 2676 aaaaaa 2681 || || Sbjct 63070 GAAGAA 63065 >seq3280 Length=83480 Score = 116 bits (128), Expect = 3e-21 Identities = 345/523 (66%), Gaps = 17/523 (3%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| | | || ||||||||||| || || || | ||||| Sbjct 42921 CTAAACTGCATCGTCGCTGTGCCCCAGAACATGGGCATTGGCAAGAACGGGCACCTGCCC 42980 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCT-TCCACT-G 2257 ||||| || || | |||||||||| |||| || | ||||||| || | |||| | Sbjct 42981 TGGCCGCCACTCAGGAATGAATTTAGGTATTTCCAGAGAATGACACAAACTCTTCACTAG 43040 Query 2258 ACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAA 2317 | ||||||||| | || ||||| || || | |||| || |||| | | || Sbjct 43041 AAAGTAAACAGAATCTGGT-GTTATGTATAGGAAAATCCGGTTCTCCATTCC--TGAGAA 43097 Query 2318 GCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACC 2375 | | | ||||| || | ||||| ||| | |||||||| ||| | || || | || || Sbjct 43098 GAATCGACCTTTAAAGGATAGAATTAATTTAGTTCTCAGCAGAGAACTCAAGGGACCTCC 43157 Query 2376 ACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGAC 2434 || || ||||| | | |||| | |||| | ||| | ||| ||| |||| | || Sbjct 43158 ACAAGGAGCTCATTCTCTTGCCAGAAGTCTGGATGA-TATCTTAAAACTTATGGAACAAC 43216 Query 2435 CAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGG 2494 |||||||| || | | | | |||||||||| ||| ||| || | ||| | | ||| Sbjct 43217 CAGAATTAGAAAATGAAATATAGACGATTTGGATAGTTGCTGGCAGTTTTGTTTCTAAGG 43276 Query 2495 AGAGCATTACAAGATCTTGCAAA----CAGATGCTGTTTTTAACAAGGATTCTGCAAAAA 2550 | ||| | ||| |||| | | || ||| | |||||||| || | Sbjct 43277 AAGCCATGA----ATCACCCAAACCATCTCAAACTATTTGTGACAAGGATCATGTGGGAC 43332 Query 2551 TTTGAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAA 2610 |||||| ||| || | || ||||||||| || | ||||| |||| || | ||| Sbjct 43333 TTTGAAAATGACACGTTTTTTCCAGAAATTGATTTGGAAAAATATAAACTTCTGCCAGAA 43392 Query 2611 TTTCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTA 2653 | |||||||||| ||||| || || || || || | |||| Sbjct 43393 TACCCAGGTGTTCTCTCTGATGTCCAGGAGGAGAAAGACATTA 43435 >seq1414 Length=1251847 Score = 116 bits (128), Expect = 3e-21 Identities = 338/512 (66%), Gaps = 10/512 (2%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGT-CTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCC 2198 |||||||| || | ||||| | | | || ||||||||||| || || || | ||||| Sbjct 1187249 CTAAACTGCATCGTCGCTGTGCCCCCAGAACATGGGCATTGGCAAGAATGGGCACCTGCC 1187308 Query 2199 ATGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATG--ACATCTTCTTCCACT 2256 ||||| || || | |||||||| | |||| || | |||| ||| ||||| Sbjct 1187309 CTGGCCGCCACTCAGGAATGAATTCAGGTATTTCCAGAGAATGACACAGACTCTTCAGTA 1187368 Query 2257 GACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAA 2316 || ||||||||| | || ||| | | || |||| |||| || |||| | | | Sbjct 1187369 GAAGATAAACAGAATCTGGT-GTTACGTGTAGGAAGATCCGGTTCTCCATTCC--TGAGA 1187425 Query 2317 AGCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCAC 2374 || | | |||| || | ||||| ||| | ||||||| ||| | || || || || | Sbjct 1187426 AGAATCGATCTTTAAAGGATAGAATTAATTTAATTCTCAGCAGAGAACTCAAGGAACCTC 1187485 Query 2375 CACGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGA 2433 ||| || ||||| ||| |||| | |||| | ||| | ||| ||| ||| | | Sbjct 1187486 CACAAGGAGCTCATTTTCTTGCCAGAAGTCTGGATGA-TATCTTCAAACTTACGGAACAA 1187544 Query 2434 CCAGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAG 2493 ||||||||| | | || || | |||||||| | ||||||| || | ||| ||| || Sbjct 1187545 CCAGAATTAGCCAATAAAGTAGAGATGATTTGGACAGTTGGTGGCAGTTTTGTTTATAAG 1187604 Query 2494 GAGAGCATTACAAGATCTTGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTT 2553 || ||| | | || | | | || ||| | |||||||| || | ||| Sbjct 1187605 GAAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGACAAGGATCATGTGGGACTTT 1187664 Query 2554 GAATGTGATACATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTT 2613 ||| |||| || | || ||||||||| || | ||||| |||| || | |||| Sbjct 1187665 GAAAGTGACACGTTTTTTCCAGAAATTTATTTGGAAAAATATAAACTTCTGCCAGAATAC 1187724 Query 2614 CCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAA 2645 |||||||||| ||||| || || || || || Sbjct 1187725 CCAGGTGTTCTCTCTGATGTCCAGGAGGAGAA 1187756 >seq6113 Length=18804593 Score = 113 bits (124), Expect = 4e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304 || || || ||||||||| | || ||||| ||||||||| | || || || ||||||||| Sbjct 9585554 GTGGTGGAGGAGCTCTTCAGGGACGGGGTGAACTGGGGGAGGATCGTGGCCTTCTTTGAG 9585613 Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364 || ||||| || ||||||||||| |||||||| | | || | |||| || |||||| Sbjct 9585614 TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAAC 9585673 Query 3365 ATTGCCGCGTGGATGACAGA 3384 || ||| ||||||||| || Sbjct 9585674 ATCGCCCTGTGGATGACTGA 9585693 >seq59 Length=9163144 Score = 102 bits (112), Expect = 7e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || || | ||| ||||||||||| || | || ||||||||| | || ||||| Sbjct 409651 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 409710 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||| || ||||||||| | ||||||||||||| ||||| || ||||| | ||| | Sbjct 409711 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 409770 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 ||||| ||||| | | || ||||||||||| |||| Sbjct 409771 ACATAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCAT 409811 >seq2725 Length=139622 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 2452 GTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTACAAGATCT 2511 || || | ||||||| || ||||||| || ||||| ||| |||| | ||| | | Sbjct 77131 GTAGAGATGATTTGGTTAGTTGGTGGCAGTTCTGTTTATAAGGAAACCATGAATCACCCA 77072 Query 2512 TGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTC 2571 || | | | || ||| | |||||||| ||| | |||||| |||| || || || Sbjct 77071 GGCCACCTTAAACTATTTGTGACAAGGATCAGGCAGGACTTTGAAAGTGACACGTATTTT 77012 Query 2572 CCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCC 2631 ||||||||| || | ||||| |||| || | |||| |||||| ||| ||| | Sbjct 77011 CCAGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAATACCCAGGTTTTCTCTCGGAT 76952 Query 2632 GTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681 || || || || || || |||| ||||||||||| ||||||| || || Sbjct 76951 GTCCAGGAGGAGAAAGGCATTAACTACAAATTTGAAGTATATGAGAAGAA 76902 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 2452 GTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTACAAGATCT 2511 || || | ||||||| || ||||||| || ||||| ||| |||| | ||| | | Sbjct 78242 GTAGAGATGATTTGGTTAGTTGGTGGCAGTTCTGTTTATAAGGAAACCATGAATCACCCA 78183 Query 2512 TGCAAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTC 2571 || | | | || ||| | |||||||| ||| | |||||| |||| || || || Sbjct 78182 GGCCACCTTAAACTATTTGTGACAAGGATCAGGCAGGACTTTGAAAGTGACACGTATTTT 78123 Query 2572 CCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCC 2631 ||||||||| || | ||||| |||| || | |||| |||||| ||| ||| | Sbjct 78122 CCAGAAATTGATTTGGAGAAATATAAACTTCTGCCAGAATACCCAGGTTTTCTCTCGGAT 78063 Query 2632 GTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681 || || || || || || ||| ||||||||||| ||||||| || || Sbjct 78062 GTCCAGGAGGAGAAAGGCATTTACTACAAATTTGAAGTATATGAGAAGAA 78013 >seq2991 Length=91112 Score = 93.3 bits (102), Expect = 3e-14 Identities = 185/268 (69%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| || | || ||||||||||| || || | | ||||| Sbjct 19556 CTAAACTGCATCGTCGCTGTGTCCCAGAACATGGGCATTGGCAAGAACCGGGACCTGCCC 19497 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCT-TCCACT-G 2257 ||||| || || | | |||||||| |||| || ||||||||| || | |||| | Sbjct 19496 TGGCCGCCGCTCAGGAGTGAATTTAGGTATTTCCAGAAAATGACACAAACTCTTCACTAG 19437 Query 2258 ACTTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAA 2317 | ||||||||| | || ||| | | || |||| ||||| || |||| | | || Sbjct 19436 AAGGTAAACAGAATCTGGT-GTTACGTGTAGGAAGATCTGGTTCTCCATTCC--TGAGAA 19380 Query 2318 GCA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACC 2375 | | | |||| || | ||||| ||| | |||||||| ||| | || || || || || Sbjct 19379 GAATCGATCTTTAAAGGATAGAATTAATTTAGTTCTCAGCAGAGAACTCAAGGAACCTCC 19320 Query 2376 ACGTGGGGCTCACTTTGTTGCAAAAAGT 2403 || || ||||| | | |||| | |||| Sbjct 19319 ACAGGGAGCTCATTCTCTTGCCAGAAGT 19292 >seq2525 Length=173222 Score = 89.7 bits (98), Expect = 4e-13 Identities = 239/360 (66%), Gaps = 18/360 (5%) Strand=Plus/Plus Query 2140 CTAAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCA 2199 |||||||| || | ||||| | | || ||||||||||| || || | | ||||| Sbjct 92846 CTAAACTGCATCGTCGCTGTGCCCCAGAACATGGGCATTGGCAAGAACCGGGACCTGCCC 92905 Query 2200 TGGCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATGACATCTTCTTCCACTGAC 2259 ||||| || || | |||||||||| |||| || | ||| | ||| ||| Sbjct 92906 TGGCCACCGCTCAGGAATGAATTTAGGTATTTCCAGAGAATAA----------CACAGAC 92955 Query 2260 T-TAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAG 2318 | | | ||||| | || ||||| | ||||||| |||| || |||| | | ||| Sbjct 92956 TCTTCACTAGAATCTGGT-GTTATGTGTAGAAAGATCCGGTTCTCCATTCC--TGAGAAG 93012 Query 2319 CA--GGCCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCA 2376 | | |||| || | ||||| ||| | |||||||||||| | || || | || ||| Sbjct 93013 AATCGATCTTTAAAGGATAGAATTAATTTAGTTCTCAGTAGAGAACTCAAGGGACCTCCA 93072 Query 2377 CGTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAA-TTATAATAGGACC 2435 | || ||||| | | |||| | |||| | ||| | ||| ||| ||| | ||| Sbjct 93073 CAAGGAGCTCATTCTCTTGCCAGAAGTCTGGATGA-TATCTTAAAACTTACGGAACAACC 93131 Query 2436 AGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGA 2495 ||||||| | | || || | || |||||| ||||||| || ||||| ||| |||| Sbjct 93132 AGAATTAGCCAATAAAGTAGAGATTATCTGGATAGTTGGTGGCAGCTCTGTTTATAAGGA 93191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414427634373412