Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8034 291 8e-74 seq9112 183 3e-41 seq11434 111 2e-19 seq9712 105 7e-18 >seq8034 Length=1360500 Score = 291 bits (322), Expect = 8e-74 Identities = 440/623 (71%), Gaps = 6/623 (1%) Strand=Plus/Plus Query 16919 ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAA 16978 |||| ||||| || ||| | ||| || ||||| |||||||| || || ||||| || Sbjct 970901 ACTCTCTCCTCTGATGGTTTGTGTACCAGGTGTTTGAACATCAGGCAAGCAAAATCACAG 970960 Query 16979 TGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCT 17038 ||||| ||||| ||||||||||||||||| | |||||||| | || |||||| |||| Sbjct 970961 TGTAAACCCTCATCTCTGCTGATAAGTTCACTGGAAAATGTGAGGCCAGGCATCAGTCCT 971020 Query 17039 CGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGAT 17098 |||||||| | ||| ||||||| || || || || |||||||| || || || || | Sbjct 971021 CGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCA 971080 Query 17099 GCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACC 17158 ||||| || | | ||||| | || || || ||||||| | |||||| | || Sbjct 971081 GCAAAGGCTACGACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCC 971140 Query 17159 CACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTT 17216 || || || || | ||| | ||| ||||||||| ||||| || | | || ||| ||| Sbjct 971141 CAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAATTCCCTT 971200 Query 17217 TTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATG 17275 | || | || || ||| || || || || || || || |||||||| || |||||| Sbjct 971201 T---CTTTGGGATCTTTTAGGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATG 971257 Query 17276 TTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACG 17335 || |||||||| || || || || || || || |||||||| | || |||||||| | Sbjct 971258 TTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGG 971317 Query 17336 TAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAAT 17395 ||||| ||| | | ||||| || || ||||| ||||| || || || || |||| Sbjct 971318 CTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGCTGCAAAGAAAGCCAGA 971377 Query 17396 ATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTG 17455 | ||| || |||||| | || || || | || ||||| || | || ||| Sbjct 971378 ACATGGAATATAAAATATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCTGAATGTCCTTG 971437 Query 17456 GATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAA 17515 || | ||||| || |||| |||||| || |||| | ||||| |||||||| | ||| Sbjct 971438 GACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATCTGCCAG 971497 Query 17516 ATATCATTGTATTGTATGGGGAA 17538 ||||| | ||| | |||||||| Sbjct 971498 ATATCGTGGTACTCGATGGGGAA 971520 >seq9112 Length=1254116 Score = 183 bits (202), Expect = 3e-41 Identities = 578/886 (65%), Gaps = 26/886 (3%) Strand=Plus/Minus Query 16661 ACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCT 16720 || || ||||| || || || || | || | || || || ||||| || || | Sbjct 511553 ACCACTCCCATCCTCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC----- 511499 Query 16721 AGAGATATATTCTCCATGAAATCAAAAGGATTAG-TAG-CTGAAAATATTTTAGAGTACC 16778 || || ||||||||||| || ||||| || || || ||||||| || | | | Sbjct 511498 AGTGAAATATTCTCCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAA--AAC 511441 Query 16779 CCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGT 16838 ||||||| | || ||| || || ||| | || || ||||| ||||| ||| | Sbjct 511440 CCAGTTCCGGCATG--TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAAT 511383 Query 16839 TCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCG 16898 |||| || || || || || | || || || | ||| || ||||| ||| | Sbjct 511382 TCATCCCAATGAGCTTCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAG 511323 Query 16899 CTTCCTTAATAATACTAGCA---ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAA 16955 | | | ||||| || | | || ||||| ||| | ||| || || || | Sbjct 511322 CAT---TGATAATTCTTTCTCTTATTCTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGA 511266 Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||||||| || || ||| | || ||||| ||||| |||| || |||||||| || |||| Sbjct 511265 ACATCAGGCAAGCAAAACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAA 511206 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | || | || |||||| |||||||||||| | ||| ||||||| || || | |||| Sbjct 511205 AGGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAG 511146 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 ||||| || || || | | ||||| | | | ||||| | || || || ||| Sbjct 511145 AAAAG---ATGCCTTCCGCTGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTT 511089 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 ||| | |||||| | | |||| || || || | ||| | ||| ||||||||| | Sbjct 511088 TGTCCCCAATCCAGTGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAA 511029 Query 17196 TGGCCTTAAA--TAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTA 17252 |||| || || || ||| |||| || | || || |||| || || || || || | Sbjct 511028 TGGCATTGAAGCGAAATTCCCTTT---CTTTGGGATCTTTTATGTAAGTGTCAATAAGGA 510972 Query 17253 GGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGG 17312 || |||||| | || |||||||| |||||||| || || || || | || || |||| Sbjct 510971 AACTATACATTCCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGG 510912 Query 17313 CTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGT 17372 |||| | | |||||||| | |||| ||| | | ||| | || || ||||| | Sbjct 510911 CTTCTGTCACCTGAACTTCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCAT 510852 Query 17373 CGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAA 17432 | || || | || || ||| | ||| | |||| | | || || || | || Sbjct 510851 CACTTGCTACAAAGAAAACCAGAACATGGGATAGAAAATCTCTCTCCTCGGGCTTCAGGG 510792 Query 17433 CGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCA 17492 ||||| | | || ||||| | ||||| || || | |||||| || ||| Sbjct 510791 ATTCCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTT 510732 Query 17493 CTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 | ||||| |||||||| | ||| ||||||| ||| | ||||||| Sbjct 510731 CCGCCTTCTTATACATCTGCCAGATATCATGGTACTCGGTGGGGAA 510686 >seq11434 Length=1819511 Score = 111 bits (122), Expect = 2e-19 Identities = 368/568 (65%), Gaps = 11/568 (2%) Strand=Plus/Plus Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018 |||| || || || | || ||||| ||||| || ||||| |||||||| || ||||||| Sbjct 311817 TCAGGCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATG 311876 Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078 | | || |||||| |||| ||||| | | ||| |||||| || || || ||||||| Sbjct 311877 TGAGGCCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAA 311936 Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138 |||| | | || || ||||| || | ||||| | | || | ||||||| Sbjct 311937 AGAAGGTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGT 311996 Query 17139 TACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGG 17198 | | |||||| | ||||| | || || | ||| | | | ||| ||| | |||| Sbjct 311997 TCCCAATCCAACACAAGACCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGG 312055 Query 17199 CCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCT 17256 | || | | || ||| |||| | | | | || || || || || || || || Sbjct 312056 CATTGAAGAGAAATTCCCTTTCT----TTGTTATCTTTAATGTGTGTCAATAAGGAGACT 312111 Query 17257 GTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 | || || || |||||||| || | || || || || || || ||||| || ||| Sbjct 312112 ATTTATGTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTC 312171 Query 17317 CGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCT 17376 | || |||| ||| ||| ||||| | | ||||| | || || || || | Sbjct 312172 TGTAATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACA 312231 Query 17377 CGCGGCGAAAAACGCC--AATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACG 17434 || || || || ||| |||||| | | || |||||| |||| || || | || | Sbjct 312232 TGCTGCAAAGAAAGCCAGAATATAGGAT--ATAAAATATCTTTCCTCAGGCTTCAGGGCT 312289 Query 17435 CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACT 17494 ||||| | | || ||||| | | ||| || | || |||| ||| | || || Sbjct 312290 TCCCAGTGCCAAATGTCCTTGGACAGGTTCACCTCCTGGGCCATCCAGAAAGAAACCTCT 312349 Query 17495 GCCTTTTTATACATATTCCAAATATCAT 17522 | || ||||| | ||||||||||||| Sbjct 312350 ACTTTCTTATATGTTTTCCAAATATCAT 312377 >seq9712 Length=6868699 Score = 105 bits (116), Expect = 7e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||||||||| || |||||||| | || |||||| ||||||||||| Sbjct 3777325 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 3777384 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| ||||||| || || || ||||||||||| || || || || | ||||| | Sbjct 3777385 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 3777444 Query 17106 C 17106 | Sbjct 3777445 C 3777445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517462656848280