Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq8034 259 5e-64 seq9112 197 1e-45 seq11434 131 2e-25 seq4492 107 2e-18 seq9712 102 8e-17 >seq8034 Length=1360500 Score = 259 bits (286), Expect = 5e-64 Identities = 419/601 (70%), Gaps = 4/601 (1%) Strand=Plus/Plus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 |||||||| ||||| || || || || || || |||| || || ||||||||||||||| Sbjct 970928 AGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGT 970987 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 || ||||||| || | || ||||| |||||||||||| | ||||||||||| ||| Sbjct 970988 TCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 971047 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 || || || |||||||| || || || || | ||||| || | | ||||| | || Sbjct 971048 AAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAG 971107 Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423 ||||| ||||| | | |||||| | |||| || || || | || | |||| | Sbjct 971108 GTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167 Query 16424 ATCGTTTCTATGGCCTT--AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTAT 16481 |||||||| ||||| || | | || ||| | |||| | ||| ||| || || | Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCC--TTTCTTTGGGATCTTTTAGGTAAGTGT 971225 Query 16482 CAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGA 16541 |||| || | ||| |||||||| || |||||||| || ||||| || || || ||||||| Sbjct 971226 CAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGA 971285 Query 16542 AGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCA 16601 | || || || || | || || ||||| | |||||| ||| ||| ||| ||||| | Sbjct 971286 AACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTA 971345 Query 16602 CGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAG 16661 | || || || ||||| ||||| || |||| | || || |||||| | || || | Sbjct 971346 CTATGCCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATCTCTCCTCGG 971405 Query 16662 ATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAA 16721 | || | ||| | | | || ||||| | ||||| || || | ||||| | Sbjct 971406 GCTTCAGGGATTCCCAGTGCTGAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGA 971465 Query 16722 AGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGA 16781 || |||| | ||||| |||||||| | ||| ||||| | ||| | ||||| || | || Sbjct 971466 AGGAAGCCTCCGCCTTCTTATACATCTGCCAGATATCGTGGTACTCGATGGGGAAGATGA 971525 Query 16782 C 16782 | Sbjct 971526 C 971526 >seq9112 Length=1254116 Score = 197 bits (218), Expect = 1e-45 Identities = 586/889 (66%), Gaps = 26/889 (3%) Strand=Plus/Minus Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961 || ||||| || || || || | || | || || |||||||| || |||| | Sbjct 511550 ACTCCCATCCTCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTCAGT----- 511496 Query 15962 GATATATTTTCCATAAAATCAAAGGGATTAG-TAG-CTGAAAATATCTTAGAGTACCCCA 16019 || ||||| |||||||| ||||| || || || ||||||| ||| | |||| Sbjct 511495 GAAATATTCTCCATAAAGTCAAATGGGTTCTCTACTCTGAAAAC--CTTGCTAAAACCCA 511438 Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTA-AGTCGCAATTA 16078 |||||| | ||| ||||| ||| | || || ||||| ||||| ||| |||||| Sbjct 511437 GTTCCGGCATG--TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGT-GCAATTC 511381 Query 16079 ATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCT 16138 || || || || || || | || | || | |||| ||||||||| ||| || Sbjct 511380 ATCCCAATGAGCTTCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCA 511321 Query 16139 TCTTTAATGATATCGGTGGCTCG-TGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACAT 16197 | |||| | || | || | | ||| ||| | || ||||| || ||||| Sbjct 511320 TTGATAATTCTTTCTCTTATTCTCTCCTCCAGT-GGTTTGTGTGCCAGGTGATTGAACAT 511262 Query 16198 TAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGT 16257 || || || || | || |||| || || |||| || |||||||| |||||||| || Sbjct 511261 CAGGCAAGCAAAACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGT 511202 Query 16258 TAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAA 16317 | || ||||| |||||||||||| | ||||||||||| ||||| | || ||||| Sbjct 511201 GAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAA 511142 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377 | || || || | | ||||| | | | |||||| | || ||||| |||| | Sbjct 511141 G---ATGCCTTCCGCTGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTC 511085 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 | |||||| | | |||| || || || | || | |||| ||||||||| ||||| Sbjct 511084 CCCAATCCAGTGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGC 511025 Query 16438 CTTAAA--CAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495 || || || ||| | |||| | ||| |||| || || ||||| || ||||| Sbjct 511024 ATTGAAGCGAAATTCCC--TTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTA 510967 Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555 |||||| | || |||||||| || ||||| || || || ||| |||| || || || || Sbjct 510966 TACATTCCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCT 510907 Query 16556 GCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTT 16615 | | || ||||| | | |||| ||| ||| ||| |||| || || || |||||| Sbjct 510906 GTCACCTGAACTTCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTT 510847 Query 16616 GCAGCAA--AAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATAT 16673 || ||| ||||| || ||| | | | |||| | | || || | | || | Sbjct 510846 GCTACAAAGAAAACCAGAACATGGGAT--AGAAAATCTCTCTCCTCGGGCTTCAGGGATT 510789 Query 16674 GCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTG 16733 ||| | | || ||||| | ||||| || || | ||||| ||| ||| | | Sbjct 510788 CCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCG 510729 Query 16734 CCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782 |||| |||||||| | ||| ||||||| ||| | |||| || | ||| Sbjct 510728 CCTTCTTATACATCTGCCAGATATCATGGTACTCGGTGGGGAAGATGAC 510680 >seq11434 Length=1819511 Score = 131 bits (144), Expect = 2e-25 Identities = 377/571 (66%), Gaps = 12/571 (2%) Strand=Plus/Plus Query 16195 CATT-AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253 |||| || || || |||| || |||| || || || ||||| |||||||| ||||||| Sbjct 311814 CATTCAGGCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAA 311873 Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCG 16313 | || | || ||||| |||| ||||| | | |||||||||| ||||| || || | Sbjct 311874 ATGTGAGGCCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAG 311933 Query 16314 AAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTT 16373 ||||||| | | || || ||||| || | ||||| | | ||| |||||| Sbjct 311934 AAAAGAAGGTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTT 311993 Query 16374 TATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTA 16433 | || | |||||| | ||||| | || || | || | ||| | || ||| | | Sbjct 311994 TGTTCCCAATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACAGGC-ATTGTTCCAA 312052 Query 16434 TGGCCTTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAA 16491 |||| || || | | ||| |||| | || |||| | || | || ||||| || | Sbjct 312053 TGGCATTGAAGAGAAATTCCCTTTCTT-TGT-TATCTTTAATGT--GTGTCAATAAGGAG 312108 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 ||| | || || || |||||||| ||| | || || || || ||||||||||| | Sbjct 312109 ACTATTTATGTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGT 312168 Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 || | || || | ||| |||| ||||| ||| ||| |||| || || || || Sbjct 312169 TTCTGTAATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATC 312228 Query 16612 ACTTGCAGCAAAAAACGCC--AATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGA 16669 || ||| ||||| || ||| ||||| | | || |||||| |||| |||| | || Sbjct 312229 ACATGCTGCAAAGAAAGCCAGAATATAGGAT--ATAAAATATCTTTCCTCAGGCTTCAGG 312286 Query 16670 ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCC 16729 | ||| | | || ||||| | | ||| || | | | |||| || | || Sbjct 312287 GCTTCCCAGTGCCAAATGTCCTTGGACAGGTTCACCTCCTGGGCCATCCAGAAAGAAACC 312346 Query 16730 ACTGCCTTTTTATACATTTTCCAAATATCAT 16760 || | || ||||| ||||||||||||||| Sbjct 312347 TCTACTTTCTTATATGTTTTCCAAATATCAT 312377 >seq4492 Length=3487830 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||| ||||| ||||||||||| | |||||||| |||| |||| Sbjct 1722499 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 1722558 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||| ||||||||| |||||||| || || || ||||| || || || |||| ||||| | Sbjct 1722559 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1722618 Query 16344 CGATTAATCGTTCC 16357 | | | || |||| Sbjct 1722619 CCACCACTCTTTCC 1722632 >seq9712 Length=6868699 Score = 102 bits (112), Expect = 8e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||||||||||||||| |||||||| || | || ||||| |||||||||||| Sbjct 3777327 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 3777386 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 | ||||||||||| ||||| || || |||||||| || || || || | ||||| || Sbjct 3777387 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGC 3777445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511332439449720