Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4158 203 4e-47 seq1936 174 2e-38 seq7379 159 4e-34 >seq4158 Length=6482985 Score = 203 bits (224), Expect = 4e-47 Identities = 278/387 (72%), Gaps = 10/387 (3%) Strand=Plus/Minus Query 176869 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 176928 ||||| | | ||||||||| ||||||| |||||||| | ||| |||| || ||| Sbjct 4409261 GTCTCGCTCTCCCTCTGCTCGTTATGGCCATCTGCTACACAGGAATCATCAAAACGCTGC 4409202 Query 176929 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 176988 ||||| ||||||| || || ||||||||||||||| ||||||| ||||||||||||| | Sbjct 4409201 TGAGGTGCCCCAGTAAAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGCTG 4409142 Query 176989 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 177048 | ||| |||| |||||||||||||| | | | |||| | ||||||| | ||| Sbjct 4409141 TGTTTTTCATTTTCTGGACACCCTACAATGTGGCTATCCTTATCTCTACCTAT----CAA 4409086 Query 177049 CCCTTCTTA-----ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGAT 177103 || ||||| || || | |||| | ||||| | ||||| || ||||| Sbjct 4409085 TCCGTCTTATTTGGACTTG-ACTGTGAACGGAGCAAGCATCTGGACCTGTTCGTGCTGGC 4409027 Query 177104 AACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGG 177163 || | | |||||| | ||||| ||| | ||||||||||||||||| || || || Sbjct 4409026 GACGGAGGTGATCGCCTACTCCCACTGCTGCGTGAACCCAGTGATCTACGCCTTTGTTGG 4408967 Query 177164 GGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTG 177223 |||| ||| | | ||||| |||||||||||||| ||||| ||| |||| | Sbjct 4408966 AGAGAGGTTCCGGAAGTACCTGCGCCACTTCTTCCACAGGCACGTGCTCATGCACCTGGG 4408907 Query 177224 CAAGTACATCCCCTTCCTGTCTGGTGA 177250 ||| |||||||| ||||| || |||| Sbjct 4408906 CAAATACATCCCATTCCTTCCTAGTGA 4408880 Score = 203 bits (224), Expect = 4e-47 Identities = 278/387 (72%), Gaps = 10/387 (3%) Strand=Plus/Minus Query 9983 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 10042 ||||| | | ||||||||| ||||||| |||||||| | ||| |||| || ||| Sbjct 4409261 GTCTCGCTCTCCCTCTGCTCGTTATGGCCATCTGCTACACAGGAATCATCAAAACGCTGC 4409202 Query 10043 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 10102 ||||| ||||||| || || ||||||||||||||| ||||||| ||||||||||||| | Sbjct 4409201 TGAGGTGCCCCAGTAAAAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGCTG 4409142 Query 10103 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 10162 | ||| |||| |||||||||||||| | | | |||| | ||||||| | ||| Sbjct 4409141 TGTTTTTCATTTTCTGGACACCCTACAATGTGGCTATCCTTATCTCTACCTAT----CAA 4409086 Query 10163 CCCTTCTTA-----ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGAT 10217 || ||||| || || | |||| | ||||| | ||||| || ||||| Sbjct 4409085 TCCGTCTTATTTGGACTTG-ACTGTGAACGGAGCAAGCATCTGGACCTGTTCGTGCTGGC 4409027 Query 10218 AACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGG 10277 || | | |||||| | ||||| ||| | ||||||||||||||||| || || || Sbjct 4409026 GACGGAGGTGATCGCCTACTCCCACTGCTGCGTGAACCCAGTGATCTACGCCTTTGTTGG 4408967 Query 10278 GGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTG 10337 |||| ||| | | ||||| |||||||||||||| ||||| ||| |||| | Sbjct 4408966 AGAGAGGTTCCGGAAGTACCTGCGCCACTTCTTCCACAGGCACGTGCTCATGCACCTGGG 4408907 Query 10338 CAAGTACATCCCCTTCCTGTCTGGTGA 10364 ||| |||||||| ||||| || |||| Sbjct 4408906 CAAATACATCCCATTCCTTCCTAGTGA 4408880 Score = 96.9 bits (106), Expect = 4e-15 Identities = 173/251 (69%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 9543 ATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTT 9602 ||||| || | |||||||| | || ||||| | || | ||| |||| || |||||| | Sbjct 4472963 ATACAAGAGGCTCAAAAACATGACCAACATCTACCTCCTGAACCTGGCCATTTCTGACCT 4473022 Query 9603 GCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGAATGTATCATGATTGGA 9661 ||| || || || || |||| || | ||| |||| | | || | |||| |||| Sbjct 4473023 GCTCTTCCTGTTCACACTGCCCTTCTTGATCTACTACAAGTCGACGG----ATGACTGGA 4473078 Query 9662 CTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCC 9721 ||| ||| | || ||||||| | ||| || | | ||||| |||||||| Sbjct 4473079 TTTTCGGTGATGCCATGTGTAAGATCCTCTCTGGGTTTTATTACACAGGCTTGTACAGCG 4473138 Query 9722 AGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAA 9781 || |||||| |||||||||||| || | |||||||| || || | ||| |||| || Sbjct 4473139 AGATCTTTTTCATCATCCTGCTGACGATTGACAGGTACCTGGCCATCGTCCATGCCGTGT 4473198 Query 9782 CTGCTTTGAGG 9792 ||| |||||| Sbjct 4473199 TTGCCTTGAGG 4473209 Score = 96.9 bits (106), Expect = 4e-15 Identities = 173/251 (69%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 176429 ATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTT 176488 ||||| || | |||||||| | || ||||| | || | ||| |||| || |||||| | Sbjct 4472963 ATACAAGAGGCTCAAAAACATGACCAACATCTACCTCCTGAACCTGGCCATTTCTGACCT 4473022 Query 176489 GCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATAT-TGGAATGTATCATGATTGGA 176547 ||| || || || || |||| || | ||| |||| | | || | |||| |||| Sbjct 4473023 GCTCTTCCTGTTCACACTGCCCTTCTTGATCTACTACAAGTCGACGG----ATGACTGGA 4473078 Query 176548 CTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCC 176607 ||| ||| | || ||||||| | ||| || | | ||||| |||||||| Sbjct 4473079 TTTTCGGTGATGCCATGTGTAAGATCCTCTCTGGGTTTTATTACACAGGCTTGTACAGCG 4473138 Query 176608 AGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAA 176667 || |||||| |||||||||||| || | |||||||| || || | ||| |||| || Sbjct 4473139 AGATCTTTTTCATCATCCTGCTGACGATTGACAGGTACCTGGCCATCGTCCATGCCGTGT 4473198 Query 176668 CTGCTTTGAGG 176678 ||| |||||| Sbjct 4473199 TTGCCTTGAGG 4473209 >seq1936 Length=760985 Score = 174 bits (192), Expect = 2e-38 Identities = 133/157 (85%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| |||||||| ||||||||| || || || ||||||||||||||||| | ||| Sbjct 747887 CAGCGCCGCAGCCTCAGCCTGAGGGTCTTCAGATTCTCCCCCAGGGAGTTCACATGCTCC 747946 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || ||| | | ||||||||| || |||||||||||||||||||||||||||||| Sbjct 747947 TTGAT---GTCTGGGTCGTGGTTCTCAGCTTGGGGCATCACCTCCTCCAGGTAAAACTGG 748003 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||||||||||| ||| ||||| ||||||||||||| Sbjct 748004 ATCATCTCAGACAAGGCTTGGCAACCCAGGTAACCCT 748040 Score = 120 bits (132), Expect = 4e-22 Identities = 84/96 (88%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 137921 CTCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACT 137980 ||||||||| ||||| | ||||||||||| ||||||||||| |||||||||||||||| Sbjct 745560 CTCAGTTTTGTATCTTCATTGTCATGTAGGCTTCTATGTAGTTGATGAAGATGTCAAACT 745619 Query 137981 CGCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 | |||||||| |||||||| ||||| || ||||||| Sbjct 745620 CACTCATGGCTTTGTAGACGCCTTTCTCTTGGAGCT 745655 >seq7379 Length=6738282 Score = 159 bits (176), Expect = 4e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||||| ||| || | |||||| || ||||||| ||||||||| |||||||| ||| Sbjct 5239852 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCAATGTTGAAAGGC 5239911 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || || |||||||| ||||| | |||||||||||||||||| ||||| | | | || Sbjct 5239912 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 5239971 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| ||| ||||| || ||||| ||||| Sbjct 5239972 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCAT 5240012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589982232816840