Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq3503 113 4e-20 seq11934 104 2e-17 seq4303 104 2e-17 seq7746 100 2e-16 >seq3503 Length=2845972 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 ||||||||| || ||| | ||||| | ||||| || ||||| ||| ||| ||||| Sbjct 460524 AAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 460465 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 | | || ||| | | || | ||| || || ||||| ||||| | || || Sbjct 460464 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 460405 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 ||| |||||||| |||||||| ||||| ||| |||||||| ||| || | || || Sbjct 460404 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGGACTTTGTCTGACTA 460345 Query 25211 CAATATTCAAAAGGAATCTACTCTTCA 25237 ||||||||||||||| ||||||||||| Sbjct 460344 CAATATTCAAAAGGAGTCTACTCTTCA 460318 >seq11934 Length=6643911 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||| || || ||||| ||||| | ||||| || ||||| ||| ||| | |||||| Sbjct 5735833 AAAACTCAGATTTTCATGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGCTGAACCC 5735892 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || ||| | || | ||| | || ||||| ||||| | || ||| Sbjct 5735893 TCGGATACGATATAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 5735952 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || |||||||| |||||||| ||||| ||| |||||||| ||| || | || ||| Sbjct 5735953 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 5736012 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 |||||||||||||| ||||||||||| | ||||| Sbjct 5736013 AATATTCAAAAGGAGTCTACTCTTCATCTCGTGTT 5736047 >seq4303 Length=4886142 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||| || ||| | ||||| | ||||| || ||||| ||| ||| |||||| Sbjct 2814577 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 2814636 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || ||| | | || | ||| || || || || ||||| | || ||| Sbjct 2814637 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGAGAAGGAAGGAATTCCTCCTGAT 2814696 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || |||||||| |||||||| ||||| ||| |||||||| ||| || | || ||| Sbjct 2814697 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGGACTTTGTCTGACTAC 2814756 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 |||| ||||||||| ||||||||||| | ||||| Sbjct 2814757 AATAGTCAAAAGGAGTCTACTCTTCATCTTGTGTT 2814791 >seq7746 Length=1950873 Score = 100 bits (110), Expect = 2e-16 Identities = 152/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||| || ||||| ||||| | ||||| || ||||| ||| ||| |||||| Sbjct 468322 AAAATGCAGATTTTCATGAAAACCCTTACGGG-AAGACCATCACCCTCGATGTTGAACCC 468264 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || ||| | | || | ||| | || ||||| ||||| | || | | Sbjct 468263 TCGGATACGATAGAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGCT 468204 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || |||||| |||||||| ||||| ||| |||||||| | ||| || | || ||| Sbjct 468203 CAGCAAAGAGGGATCTTTGCTGGCAAGCAACTGGAAGATGCATGGACTTTGTCTGACTAC 468144 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 |||||||||||||| ||||||||||| | ||||| Sbjct 468143 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 468109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410732610560894