Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq5491 125 6e-24 seq3414 116 3e-21 seq3359 116 3e-21 seq9023 105 6e-18 seq5702 98.7 9e-16 seq4303 96.9 3e-15 seq3503 96.9 3e-15 seq3525 93.3 4e-14 seq3192 93.3 4e-14 seq3144 93.3 4e-14 seq11879 87.8 2e-12 seq3214 84.2 2e-11 >seq5491 Length=6255621 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || |||||||| || || |||||| ||| || ||||| ||||| Sbjct 1751723 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCG 1751782 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| |||||||| ||||| ||||| ||| || ||| || Sbjct 1751783 GCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTTGCCTTG 1751842 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| || ||||||||||| ||| | || ||||| ||||| || Sbjct 1751843 ACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 1751902 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 1751903 TTCACGAAGATCTGCAT 1751919 >seq3414 Length=2822291 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || |||||||| || | |||||| ||| || Sbjct 171825 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 171884 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||| | |||||| ||||| || ||||| ||||| || Sbjct 171885 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGG 171944 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | ||||| |||||| || ||| ||||| | ||| | || ||| Sbjct 171945 ATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTG 172004 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || |||||||| Sbjct 172005 CCGGTCAGGGTCTTCACGAAGATCTGCAT 172033 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| || | |||||| ||| || Sbjct 171369 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCC 171428 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||| | |||||| ||||| || ||||| || || ||| Sbjct 171429 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGG 171488 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||||| |||||| || ||| ||||| | ||| | || ||| Sbjct 171489 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTG 171548 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || ||||| |||||||| Sbjct 171549 CCGGTCAGGGTCTTCACAAAGATCTGCAT 171577 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| || | |||||| ||| || Sbjct 171597 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCC 171656 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||| | |||||| ||||| || ||||| || || || Sbjct 171657 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGG 171716 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||||| |||||| || ||| || || | ||| | || ||| Sbjct 171717 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 171776 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || |||||||| Sbjct 171777 CCGGTCAGGGTCTTCACGAAGATCTGCAT 171805 >seq3359 Length=286138 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||| ||| | || |||||||| || |||||||| || | ||||| ||| Sbjct 33437 CAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCAGCCATC 33378 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || |||||||| || || | || ||||||||||| || || || || ||||||||||| Sbjct 33377 TTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTC 33318 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | |||||| ||| || | || | |||||| || || | |||| | | | | || Sbjct 33317 TTGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTTGCCCTCAAGGTTGATGGT 33258 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||| | || || || ||||| ||||||||| Sbjct 33257 TTTGCCCGGGAGGGTCTTCACAAAGATCTGCATG 33224 >seq9023 Length=1944319 Score = 105 bits (116), Expect = 6e-18 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 118545 GACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAG 118602 |||||||| || |||||| | || | | || ||||| |||||| |||||||| || | Sbjct 753092 GACTCTTTCTGGATGTTGCAGTC--TGAGAGAGCGCGGCCATCCTCCAGCTGTTTGCCCG 753149 Query 118603 CGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAA 118662 | | || ||||||||||| || | || |||||||||||| || |||||| || | Sbjct 753150 CAAATATCAGACGCTGCTGGTCAAGTGGGATGCCCTCCTTGGCTTGAATTTTGGCCTTGA 753209 Query 118663 CCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTT 118722 | | || |||||| || ||||||||||| ||| | || ||||| | || || | Sbjct 753210 CATTCTCAGTGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTGCGAGGGTCT 753269 Query 118723 TTACAAAAATCTGCAT 118738 | ||||| |||||||| Sbjct 753270 TCACAAAGATCTGCAT 753285 >seq5702 Length=3466958 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| || | || |||||||| || |||||||| | | |||||| ||| Sbjct 1722253 CAGCACCAGGTTTAGGGTGGACTCTTTCTGGATGTTGTAGCCTGAGAGAGTGCGGCCATC 1722312 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCC-TCCTTGT 118644 ||| |||||||| ||||| || ||| ||||||| || || || || ||| ||||||| Sbjct 1722313 CTCCAGCTGTTTCCCAGCAAGTATCAGATGCTGCTGGTCAGGTGGGATACCCCTCCTTGT 1722372 Query 118645 CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCG 118704 || |||||| ||| || | | | |||||| || ||| | ||| | ||| | | Sbjct 1722373 CTTGAATTTTGGCTTTGACATTCTAAATGGTGTCACTGGGCTCAATCTCAAGGGTGATGG 1722432 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| || || || || ||||| |||||||| Sbjct 1722433 TCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 1722466 >seq4303 Length=4886142 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||||||||| | || | |||||||| |||||| | ||||| || Sbjct 2814807 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCAGA 2814748 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| || ||| || || || || ||||| |||| || | |||||||| ||||| Sbjct 2814747 CAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 2814688 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || || || || || | ||| | || |||| | || || Sbjct 2814687 AATTCCTTCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 2814628 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||| | || || || || || ||||| || ||||||||||| Sbjct 2814627 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2814580 >seq3503 Length=2845972 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | |||||| || | || | |||||||| |||||||| ||||| || Sbjct 460293 ACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGA 460352 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| || ||| || || || || ||||| |||| || | |||||||| ||||| Sbjct 460353 CAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 460412 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || || || || || | ||| | || |||| | || || Sbjct 460413 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 460472 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||| | || || || || || ||||| || ||||||||||| Sbjct 460473 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 460520 >seq3525 Length=3185992 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| || | || |||||||| || ||||| ||||| | |||| | |||||| Sbjct 2397048 CACCACCTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAAAGAGTGTGGCCATCCTC 2396989 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 | |||||| || | | || ||| ||||||| || || || |||||||||||||| Sbjct 2396988 CAACTGTTTGCCCACAAATATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCATG 2396929 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||| || | ||| |||||| || || |||||| | ||| | ||| | Sbjct 2396928 GATCTTGGCTTTGACATTTTCACTGGTGTCACTGGGCTGGACCTCAAAGGTGATGGTTCT 2396869 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || || |||||| | ||||||||| || Sbjct 2396868 TCCTGTGAGGGTCTTTACAGAGATCTGCATGTCT 2396835 >seq3192 Length=5961771 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||| | || |||||||| || |||||||| || | ||||| ||| Sbjct 5502442 CAGCACCATGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCAGCCATC 5502383 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| |||||||| || || || ||| ||||||| || || || |||||||||||||| Sbjct 5502382 CTCCAGCTGTTTGCCCGCAAGTATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTC 5502323 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | |||||| || || | || |||||| | ||||| ||| | |||| Sbjct 5502322 TTGAATTTTGGTGTTGACATTCTCAGTGGTGTCACTCGGCTCGATCTCAAAGGTC----- 5502268 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || ||||| ||||||| Sbjct 5502267 -TTGCCTGTGAGGGTCTTCACAAAGGTCTGCAT 5502236 >seq3144 Length=887747 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||| |||||| |||||||| || | ||||| |||||| Sbjct 249310 ACCAGGTGCACGGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGCAGCCATCCTCC 249369 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| | || ||||||||||| || || || || ||||| |||||| | Sbjct 249370 AGCTGCTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCTTTGTCTTGA 249429 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| | | || ||||| || ||||||||| | | | | || ||| Sbjct 249430 ATTTTGGCTTTGAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGATGATGGTCTTG 249489 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || | ||||| | |||||| Sbjct 249490 CCCGTGAGGGTCTCCACAAAGAGCTGCAT 249518 >seq11879 Length=1036973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||| ||| | || ||||||| |||| ||| || | ||| || ||| Sbjct 345961 CAGCACCAGGTGCAGGGTGGACTCTTCCCAGATGTCGTAGTCTGAGAGAGTTCGGCCATC 346020 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| |||||||| || || || ||| ||||||| || || || || ||||||||||| Sbjct 346021 CTCCAGCTGTTTGCCGGCAAGTATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGTC 346080 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | |||||| ||| || | || |||||| || || |||||| | || | || Sbjct 346081 TTGAATTTTGGCTTTGACATCCTCATTGGTGTCACTGGGCTTGACCTCAAGAGTGATGGT 346140 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || ||||| |||||||| Sbjct 346141 CTTGCCCGTAAGTGTCTTCACAAAGATCTGCAT 346173 >seq3214 Length=3208335 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 118515 CCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATA 118574 || || | ||||||||| || || | ||||||||||||||||| ||||| || || | Sbjct 1956904 CCACGGAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAA 1956845 Query 118575 GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATG 118634 || || ||| || || || || ||||| |||| | | |||| || | ||||| || Sbjct 1956844 GTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATT 1956785 Query 118635 CCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCG 118694 || ||||| | || || || || | || | || |||| | || |||||| Sbjct 1956784 CCTTCCTTAACCTGGATCTTGGCCTTTACATTTTATATCGTATCCGAGGGTTCAACCTCG 1956725 Query 118695 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||| | || || || || || ||| | || ||||||||||| Sbjct 1956724 AGGGTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCAT 1956681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433762611424132