Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq11934 102 1e-16 seq3503 102 1e-16 seq7746 93.3 6e-14 seq4303 93.3 6e-14 seq6158 89.7 8e-13 >seq11934 Length=6643911 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || || Sbjct 5736062 CCACCACGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 5736004 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||| Sbjct 5736003 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 5735944 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 5735943 AATTCCTTCCTTATCCTG 5735926 >seq3503 Length=2845972 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || || Sbjct 460294 CCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 460352 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||| Sbjct 460353 CAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 460412 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 460413 AATTCCTTCCTTATCCTG 460430 >seq7746 Length=1950873 Score = 93.3 bits (102), Expect = 6e-14 Identities = 107/139 (77%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || || Sbjct 468094 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 468152 Query 146110 AAGAGTTC-TGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | ||| | ||| ||| || | ||| || |||||||| ||| |||||||||| | |||| Sbjct 468153 CAAAGTCCATGC-ATCTTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAG 468211 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||| ||||| || Sbjct 468212 GAATTCCTTCCTTATCCTG 468230 >seq4303 Length=4886142 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || |||| || || || Sbjct 2814806 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAC-TATTGTAGTCAGA 2814748 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||| Sbjct 2814747 CAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 2814688 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| || || || Sbjct 2814687 AATTCCTTCCTTCTCCTG 2814670 >seq6158 Length=9241946 Score = 89.7 bits (98), Expect = 8e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 10437 GGATGTTATGCAAGATTAGCTCC-CAGATCTGATTTAGCTCTAAATAAATTTATTGATAT 10495 || ||||||| |||| ||||||| ||| || | || ||| ||| | ||||||||| | Sbjct 4167291 GGGTGTTATGGAAGAGTAGCTCCACAG-TCAGGCTTGGCTGCAAAACACTTTATTGATGT 4167233 Query 10496 TGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCA 10555 |||||||| || || | |||||||||||||||||||| || || || | |||||| Sbjct 4167232 AGGAGCTGGTGTCATAAATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTT 4167173 Query 10556 TTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAA 10615 | || ||| | ||| | | || | || ||| |||| | || | || || ||| Sbjct 4167172 TGGCAAAGAAAAGTTTGAAGTCAAAAAGGGTGATCGAATTGCACAGCTCATTTGCGAACG 4167113 Query 10616 AATTTTATATCCTAAAAT 10633 ||||| ||||| |||| Sbjct 4167112 GATTTTTTATCCAGAAAT 4167095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743407240600320