Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq8034 221 1e-52
seq9112 190 2e-43
seq11434 116 3e-21
seq4492 111 1e-19
seq9712 102 8e-17
>seq8034
Length=1360500
Score = 221 bits (244), Expect = 1e-52
Identities = 401/582 (69%), Gaps = 6/582 (1%)
Strand=Plus/Plus
Query 16219 GTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278
|||||| ||||| | |||||||||||||| || || || || || || || || | ||
Sbjct 970930 GTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGTTC 970989
Query 16279 GTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA 16338
| |||||||| || || ||||| ||||||||||| || | ||| ||||| | |||||
Sbjct 970990 ACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAA 971049
Query 16339 TGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT 16398
||||| |||||||| || ||||| ||||| ||||| || || | || ||||| || ||
Sbjct 971050 AGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAGGT 971109
Query 16399 --TCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTC 16456
|| ||| | | | ||||| ||||||| ||| || | || ||||| |
Sbjct 971110 AGCCTCTTTGTCC--CCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167
Query 16457 ATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCT 16516
|| | || || ||||| || | | | | |||||||| |||| | ||||| ||
Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCA 971227
Query 16517 ATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAG 16576
|| || | |||||||||||| ||||| || || ||||| || || || || ||||| ||
Sbjct 971228 ATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 971287
Query 16577 CATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACT 16636
|| | ||||| | || || ||||| | ||| | || | |||||||| || |||
Sbjct 971288 CAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 971347
Query 16637 ATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGT-TATC 16695
|| |||||||| |||||||| || || || | || ||||||| | | || | |
Sbjct 971348 ATGCCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATCTCTCCTCGGGC 971407
Query 16696 TGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAA 16755
| | | || ||||| || || || || | || ||||| || | ||||| ||
Sbjct 971408 TTCAGGGATT-CCCAGTGCTGAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAA 971466
Query 16756 AGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTA 16797
||||| | ||||| |||||||| | ||| || || | |||
Sbjct 971467 GGAAGCCTCCGCCTTCTTATACATCTGCCAGATATCGTGGTA 971508
>seq9112
Length=1254116
Score = 190 bits (210), Expect = 2e-43
Identities = 601/919 (65%), Gaps = 22/919 (2%)
Strand=Plus/Minus
Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944
|||| || ||| ||| | | ||| ||| ||| || ||| |||| ||| |||
Sbjct 511600 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 511541
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
| ||||| || | |||||||| |||||||| || || |||| | ||||||||| |
Sbjct 511540 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 511486
Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC---ATCCCAATTCCAACA 16061
||||||| ||||| || || | | || | | | | || | |||| |||| ||
Sbjct 511485 CCATAAAGTCAAATGGGTTCTCT--ACTCT-GAAAACCTTGCTAAAACCCAGTTCCGGCA 511429
Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121
||| || |||||| | || || || || ||||||| | || ||||| || || |
Sbjct 511428 TG--TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 511371
Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181
|| ||||| | || || || | || | | |||||| ||| || | || |||
Sbjct 511370 GCTTCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCATTGATAATTC 511311
Query 16182 TATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCA 16240
| ||||||| | | || | | || || | | ||| || ||||| | ||||||
Sbjct 511310 TTTCTCTTATT-CTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCA 511252
Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300
||| |||| || || || || || | ||| || | || || ||||| || || || |||
Sbjct 511251 AAACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGC 511192
Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360
|| ||||||||||| || | ||| ||||| | ||||| ||||||||||| || |||
Sbjct 511191 ATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAG---ATGCCT 511135
Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT-TCTAtttttactttctatcca 16419
|| ||| ||||| | || | || || || || || || ||| | | |||||
Sbjct 511134 TCCGCTGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTC-CCCAATCCA 511076
Query 16420 ttttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAA 16479
| ||||||| ||| || | || ||||| ||| | || || ||||| ||
Sbjct 511075 GTGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCG 511016
Query 16480 ATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGA 16539
| | | |||||||| |||| || ||||| || || || |||||||||||| | ||
Sbjct 511015 AAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGA 510956
Query 16540 ATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTAC 16599
||| || || ||||| || || || || ||| | || || | ||||| | | || ||
Sbjct 510955 ATGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAAC 510896
Query 16600 TTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAA 16659
||| | | | | || | |||||| | || ||||| ||||| || ||| |||| ||
Sbjct 510895 TTCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAA 510836
Query 16660 CGCAAGTATGTGTTTAATAAAAtttttttCGT-TATCTGAAAGTTTTAACCAGTCAGAAA 16718
| || | || | ||||| | | || | || | | || ||||| |||
Sbjct 510835 AACCAGAACATGGGATAGAAAATCTCTCTCCTCGGGCTTCAGGGATT-CCCAGTGCCAAA 510777
Query 16719 AATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACA 16778
|| || || | || ||||| || | ||||| || ||||| | ||||| |||||||
Sbjct 510776 TGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACA 510717
Query 16779 TTTTCCATATGTCTTCGTA 16797
| | ||| || || | |||
Sbjct 510716 TCTGCCAGATATCATGGTA 510698
>seq11434
Length=1819511
Score = 116 bits (128), Expect = 3e-21
Identities = 300/455 (66%), Gaps = 3/455 (1%)
Strand=Plus/Plus
Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294
|||||||| | ||| || || || || || || || || | || || |||||||| ||
Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881
Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354
|| ||||| |||||| |||| | | ||| ||||| ||||| ||||||||||||||
Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941
Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414
| | ||| ||| |||||| || | | || || || | || || ||| | |
Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001
Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474
||||| ||||| ||| || | || |||||| ||||| | || |||||
Sbjct 312002 ATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACAGGCATTGTTC-CAATGGCATTG 312060
Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534
|| | | | | |||||||| ||||| ||| | || || || || | ||||| ||
Sbjct 312061 AAGAGAAATTCCCTTTCTTTGTTATCTTTAATGT--GTGTCAATAAGGAGACTATTTATG 312118
Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594
|| ||||| || || || | || || || || ||||| ||||| | ||| | ||
Sbjct 312119 TCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATC 312178
Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654
|| | ||| ||| ||| | |||||||| | ||||| ||||| | ||||||
Sbjct 312179 TGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCA 312238
Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttC 16689
|| || || || || | ||||||| | ||||
Sbjct 312239 AAGAAAGCCAGAATATAGGATATAAAATATCTTTC 312273
>seq4492
Length=3487830
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944
|||||||||| ||| | | || || |||||| | | | || |||||||| |
Sbjct 1711253 TTTAAAAATCTGCATCCAAGGTGAAGACGTTATCTGTGGTTTCTGCCATAACTGCAAAAC 1711312
Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004
||||| || ||||| || |||||||||||||||||||||||||| ||||| ||||
Sbjct 1711313 GCTGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTT 1711372
Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028
||||||||||||||||||||| ||
Sbjct 1711373 CCATAAAATCAAAAGGATTTTCTG 1711396
>seq9712
Length=6868699
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
|| || || || || | || || |||||||| || || ||||| ||||||||||| ||
Sbjct 3777327 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 3777386
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| ||||| | ||||| |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 3777387 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 3777446
Query 16379 ACCAATCGCTCACC 16392
|| | || |||||
Sbjct 3777447 ACAACACGTTCACC 3777460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462437876670600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |