Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq8034 221 1e-52 seq9112 190 2e-43 seq11434 116 3e-21 seq4492 111 1e-19 seq9712 102 8e-17 >seq8034 Length=1360500 Score = 221 bits (244), Expect = 1e-52 Identities = 401/582 (69%), Gaps = 6/582 (1%) Strand=Plus/Plus Query 16219 GTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278 |||||| ||||| | |||||||||||||| || || || || || || || || | || Sbjct 970930 GTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGTTC 970989 Query 16279 GTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA 16338 | |||||||| || || ||||| ||||||||||| || | ||| ||||| | ||||| Sbjct 970990 ACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAA 971049 Query 16339 TGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT 16398 ||||| |||||||| || ||||| ||||| ||||| || || | || ||||| || || Sbjct 971050 AGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAGGT 971109 Query 16399 --TCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTC 16456 || ||| | | | ||||| ||||||| ||| || | || ||||| | Sbjct 971110 AGCCTCTTTGTCC--CCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167 Query 16457 ATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCT 16516 || | || || ||||| || | | | | |||||||| |||| | ||||| || Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCA 971227 Query 16517 ATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAG 16576 || || | |||||||||||| ||||| || || ||||| || || || || ||||| || Sbjct 971228 ATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 971287 Query 16577 CATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACT 16636 || | ||||| | || || ||||| | ||| | || | |||||||| || ||| Sbjct 971288 CAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 971347 Query 16637 ATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGT-TATC 16695 || |||||||| |||||||| || || || | || ||||||| | | || | | Sbjct 971348 ATGCCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATCTCTCCTCGGGC 971407 Query 16696 TGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAA 16755 | | | || ||||| || || || || | || ||||| || | ||||| || Sbjct 971408 TTCAGGGATT-CCCAGTGCTGAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAA 971466 Query 16756 AGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTA 16797 ||||| | ||||| |||||||| | ||| || || | ||| Sbjct 971467 GGAAGCCTCCGCCTTCTTATACATCTGCCAGATATCGTGGTA 971508 >seq9112 Length=1254116 Score = 190 bits (210), Expect = 2e-43 Identities = 601/919 (65%), Gaps = 22/919 (2%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||| || ||| ||| | | ||| ||| ||| || ||| |||| ||| ||| Sbjct 511600 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 511541 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 | ||||| || | |||||||| |||||||| || || |||| | ||||||||| | Sbjct 511540 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 511486 Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC---ATCCCAATTCCAACA 16061 ||||||| ||||| || || | | || | | | | || | |||| |||| || Sbjct 511485 CCATAAAGTCAAATGGGTTCTCT--ACTCT-GAAAACCTTGCTAAAACCCAGTTCCGGCA 511429 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 ||| || |||||| | || || || || ||||||| | || ||||| || || | Sbjct 511428 TG--TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGA 511371 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 || ||||| | || || || | || | | |||||| ||| || | || ||| Sbjct 511370 GCTTCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCATTGATAATTC 511311 Query 16182 TATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCA 16240 | ||||||| | | || | | || || | | ||| || ||||| | |||||| Sbjct 511310 TTTCTCTTATT-CTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCA 511252 Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300 ||| |||| || || || || || | ||| || | || || ||||| || || || ||| Sbjct 511251 AAACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGC 511192 Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360 || ||||||||||| || | ||| ||||| | ||||| ||||||||||| || ||| Sbjct 511191 ATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAG---ATGCCT 511135 Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT-TCTAtttttactttctatcca 16419 || ||| ||||| | || | || || || || || || ||| | | ||||| Sbjct 511134 TCCGCTGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTC-CCCAATCCA 511076 Query 16420 ttttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAA 16479 | ||||||| ||| || | || ||||| ||| | || || ||||| || Sbjct 511075 GTGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCG 511016 Query 16480 ATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGA 16539 | | | |||||||| |||| || ||||| || || || |||||||||||| | || Sbjct 511015 AAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGA 510956 Query 16540 ATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTAC 16599 ||| || || ||||| || || || || ||| | || || | ||||| | | || || Sbjct 510955 ATGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAAC 510896 Query 16600 TTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAA 16659 ||| | | | | || | |||||| | || ||||| ||||| || ||| |||| || Sbjct 510895 TTCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAA 510836 Query 16660 CGCAAGTATGTGTTTAATAAAAtttttttCGT-TATCTGAAAGTTTTAACCAGTCAGAAA 16718 | || | || | ||||| | | || | || | | || ||||| ||| Sbjct 510835 AACCAGAACATGGGATAGAAAATCTCTCTCCTCGGGCTTCAGGGATT-CCCAGTGCCAAA 510777 Query 16719 AATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACA 16778 || || || | || ||||| || | ||||| || ||||| | ||||| ||||||| Sbjct 510776 TGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACA 510717 Query 16779 TTTTCCATATGTCTTCGTA 16797 | | ||| || || | ||| Sbjct 510716 TCTGCCAGATATCATGGTA 510698 >seq11434 Length=1819511 Score = 116 bits (128), Expect = 3e-21 Identities = 300/455 (66%), Gaps = 3/455 (1%) Strand=Plus/Plus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||| | ||| || || || || || || || || | || || |||||||| || Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| |||||| |||| | | ||| ||||| ||||| |||||||||||||| Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 | | ||| ||| |||||| || | | || || || | || || ||| | | Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 ||||| ||||| ||| || | || |||||| ||||| | || ||||| Sbjct 312002 ATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACAGGCATTGTTC-CAATGGCATTG 312060 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || | | | | |||||||| ||||| ||| | || || || || | ||||| || Sbjct 312061 AAGAGAAATTCCCTTTCTTTGTTATCTTTAATGT--GTGTCAATAAGGAGACTATTTATG 312118 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || ||||| || || || | || || || || ||||| ||||| | ||| | || Sbjct 312119 TCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATC 312178 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || | ||| ||| ||| | |||||||| | ||||| ||||| | |||||| Sbjct 312179 TGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCA 312238 Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttC 16689 || || || || || | ||||||| | |||| Sbjct 312239 AAGAAAGCCAGAATATAGGATATAAAATATCTTTC 312273 >seq4492 Length=3487830 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||||||||| ||| | | || || |||||| | | | || |||||||| | Sbjct 1711253 TTTAAAAATCTGCATCCAAGGTGAAGACGTTATCTGTGGTTTCTGCCATAACTGCAAAAC 1711312 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 ||||| || ||||| || |||||||||||||||||||||||||| ||||| |||| Sbjct 1711313 GCTGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTT 1711372 Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028 ||||||||||||||||||||| || Sbjct 1711373 CCATAAAATCAAAAGGATTTTCTG 1711396 >seq9712 Length=6868699 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || || | || || |||||||| || || ||||| ||||||||||| || Sbjct 3777327 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 3777386 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| | ||||| |||||||||||||| || ||||| ||||| ||||| || Sbjct 3777387 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 3777446 Query 16379 ACCAATCGCTCACC 16392 || | || ||||| Sbjct 3777447 ACAACACGTTCACC 3777460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462437876670600