Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq4458 1561 0.0 seq4603 127 1e-24 >seq4458 Length=3422643 Score = 1561 bits (1730), Expect = 0.0 Identities = 1370/1697 (81%), Gaps = 51/1697 (3%) Strand=Plus/Plus Query 107097 AGCTGGTTTGCAGCATCAGGTTACAGATGTCCATCCAC------------AAGGGTCT-T 107143 |||| ||||| || ||||||||||||| |||||| || |||||| | | Sbjct 3096569 AGCTAGTTTGTAGGGTCAGGTTACAGATCTCCATCAACGAACCAGATGTAAAGGGTTTCT 3096628 Query 107144 AGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCATCACTCTG 107203 ||||||| ||| ||| |||||| ||||| | |||| | | | ||| |||||| | || Sbjct 3096629 AGGCAGGTCTTTACTAAGGATACTTGTCCAGGTAAGAACTATTT-TTTGCCATCAGTTTG 3096687 Query 107204 GAGTTGAACTTGATGTT-CTGG-----ATTAGTTTGTAATTAAAGGCATTTTGTTCTGTC 107257 || |||||||||||||| |||| || ||||||||| | ||||||||||||||||| Sbjct 3096688 GAATTGAACTTGATGTTTCTGGGAATGATGAGTTTGTAACTGGAGGCATTTTGTTCTGTC 3096747 Query 107258 CAAGGATC---TCCTCCTCCACCTTGCCTGTGCCCAAACTCT-CCTGATCTCCCATCCCA 107313 ||||||| |||||||| |||| |||||| ||| ||| |||| ||| || | || Sbjct 3096748 CAAGGATTGTGTCCTCCTCTTCCTTCCCTGTGGTCAATCTCCACCTG-TCTACCCTTCCG 3096806 Query 107314 TGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTGGGCT 107373 ||| |||| | ||||||| || || |||||| ||| | ||||||||||||||| Sbjct 3096807 TGACAATGGTTCAATGGAAGA-GA--CTCTGCCGGCAGCATTACTTGTGGGCCCTGGGCT 3096863 Query 107374 GCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGATGTAG 107433 ||||||||||||||||| |||| |||||| |||||| | ||||| || ||||| | Sbjct 3096864 GCTATATGCTGCTGGCCATTGTGGCTCTGAAACTTTCTTTAAGGTTGAAGTGTGACTCTG 3096923 Query 107434 ATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTGTACA 107493 | ||||| ||||||||||||||| || || || ||| |||||||| | || ||||| | Sbjct 3096924 ACCACTTGGGTCTGGAGTCCAGGGAATTTCAAAGCCAGTACTGTAGGAATATCTTGTATA 3096983 Query 107494 ATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGGGACC 107553 || |||||| |||||||||||||| || ||||||||||| |||||||| |||||||||| Sbjct 3096984 ATTCCCTGAAACTGCCAGCAAAGAGGTCTATCAACTGTTCAGGGATCACCCGAGGGGACC 3097043 Query 107554 AGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTC 107613 ||||| ||| | ||||| | || | |||||||| || ||||| |||||| |||| Sbjct 3097044 CAGAAGCCGTGTTTCAGGCTATTCTGAATAACCTGGAGGTCAAGAAGAAGCGGGAGCCTT 3097103 Query 107614 TCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGA 107673 | || | |||| | || ||| | | |||||||||||||| ||||||||||| |||||| Sbjct 3097104 TTACAGACACCCACTATCTCTCCCTCACCAGAGACTGTGAACGCTTCAAGGCGGAAAGGA 3097163 Query 107674 AGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGG 107733 |||||||||||||||||||||| ||||||||| | || ||||| ||||| ||||| |||| Sbjct 3097164 AGTTCATACAGTTCCCACTGAGCAAAGAAGAGGTGGAGTTCCCTATTGCGTACTCTATGG 3097223 Query 107734 TGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGA 107793 || | |||||||||||||||||||||||| |||| |||||||| |||||||||||||||| Sbjct 3097224 TGATTCATGAGAAGATTGAAAACTTTGAAAGGCTACTGCGAGCTGTGTATGCCCCTCAGA 3097283 Query 107794 ACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGG 107853 |||||||||| |||||||||||| |||||||||||| |||||||||||||| ||||| | Sbjct 3097284 ACATATACTGCATCCACGTGGATGAGAAGTCCCCAGAAACTTTCAAAGAGGCAGTCAAAG 3097343 Query 107854 CCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATG 107913 | |||||||| |||||||| ||||||||||| ||||||||| |||| | |||| |||| | Sbjct 3097344 CAATTATTTCGTGCTTCCCAAATGTCTTCATAGCCAGTAAGCTGGTTCGGGTGATTTACG 3097403 Query 107914 CCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAG 107973 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 3097404 CCTCCTGGTCCAGGGTGCAAGCTGACCTCAACTGCATGGAAGACTTGCTCCAGAGCTCAG 3097463 Query 107974 TGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCG 108033 |||||||||| ||||| ||||||||||||||||| ||||| || |||||| |||||||| Sbjct 3097464 TGCCATGGAAATACTTCCTGAATACATGCGGGACGGACTTTCCTCTAAAGAGCAATGCCG 3097523 Query 108034 AGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTT 108093 ||||||||| ||| |||||||||||||| || | ||| || |||||| | ||||||||| Sbjct 3097524 AGATGGTCCAGGCTCTCAAGATGTTGAATGGGAGGAATAGCATGGAGACAGAGGTACCTC 3097583 Query 108094 CTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAG---GTGACAGACACACTGTACC 108150 | || |||| ||| |||||| |||| | || |||| ||| |||||| | ||| Sbjct 3097584 CCAAGCACAAACAAACCCGCTGGGAATATCACTTTGAGGTAGTGGGGGACACATTACACC 3097643 Query 108151 CTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCT 108210 |||| ||||| |||||| ||||||||| |||||||| | ||||| ||||||||||| | Sbjct 3097644 TAACCAACAAGAAGAAGGATCCTCCCCCTTATAATTTAACTATGTTTACAGGGAATGCGT 3097703 Query 108211 ATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGAC 108270 || ||||||| || |||| |||||||||||||| || | ||||||||||||||| || Sbjct 3097704 ATATTGTGGCTTCCCGAGATTTTGTCCAACATGTTTTGAAGAACCCTAAATCCCAACAAC 3097763 Query 108271 TGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGC 108330 || |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 3097764 TGATTGAATGGGTAAAAGACACCTATAGCCCTGATGAACACCTCTGGGCCACCCTTCAGC 3097823 Query 108331 GTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGA 108390 |||| | ||||||||||||||||||||| | |||||||||||| ||||||||||||||| Sbjct 3097824 GTGCACGGTGGATGCCTGGCTCTGTTCCCAACCACCCCAAGTACGACATCTCAGACATGA 3097883 Query 108391 CTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGC 108450 || | || |||||||| |||||||||||| | || |||||||| || | ||| || | Sbjct 3097884 CTTCTATTGCCAGGCTGGTCAAGTGGCAGGATCATGAGGGAGACATCGATAAGGGTGCTC 3097943 Query 108451 CTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACC 108510 ||||||| || |||||||||||||| | | |||| ||||| |||| ||||| |||||| Sbjct 3097944 CTTATGCCCCTTGCTCTGGAATCCACCAGCGGGCTATCTGTGTTTATGGGGCTGGGGACT 3098003 Query 108511 TGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATG 108570 || ||||||| || || ||||||||||| ||||| |||||||||||||| | ||| |||| Sbjct 3098004 TGCACTGGATGCTTCAAAACCATCACCTGTTGGCCAACAAGTTTGACCCAAAGGTAGATG 3098063 Query 108571 ATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGAAC 108630 |||| | || |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3098064 ATAATGCTCTTCAGTGCTTAGAAGAGTACCTACGTTATAAGGCCATCTATGGGACTGAAC 3098123 Query 108631 TTTGAG-----CT------GCA-------CTGT-GGGCCAGGGACTGTGCCAACATGCCC 108671 |||||| || ||| |||| |||| || | ||| | ||||||| | Sbjct 3098124 TTTGAGACACACTATGGGAGCATTGCTACCTGTGGGGCAAGAGCATGTACAAACATGCTC 3098183 Query 108672 AGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCATCCCCC 108731 || | | |||| || ||| ||||||| ||| |||||| || ||| ||||||||||| Sbjct 3098184 AGAACTTGCTGGGACAGTG-CGGGTGGGAGACCAGGGCTTTGCAATTCATGGCATCCCTT 3098242 Query 108732 AGGGTCAGAGGGCTGCT 108748 ||| || || ||||| Sbjct 3098243 AGGACAAGGGGTCTGCT 3098259 >seq4603 Length=3798766 Score = 127 bits (140), Expect = 1e-24 Identities = 573/897 (64%), Gaps = 51/897 (6%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || |||||||||||| ||| || || || || || || || ||||| ||| | ||| Sbjct 2395821 CCCCTTAGTAAAGAAGAGGCAGAGTTTCCAATAGCATATTCTATAGTGGTTCATCACAAG 2395762 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||||||| | ||| | ||| |||||||| | || || | Sbjct 2395761 ATTGAAATGCTTGACAGGCTGCTGAGGGCCATCTATATGCCTCAGAATTTCTATTGCATT 2395702 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAA---AGAGGCGGTCAAGGCCATTATTTCC 107864 || ||||| || ||| ||| || | | || || || | || ||| |||| Sbjct 2395701 CATGTGGACACAAAATCC---GAGGATTCCTATTTAGCTGCAGTGATGGGCATCGCTTCC 2395645 Query 107865 TGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCC 107924 || ||| |||||||| ||||||| |||| ||||||||||| || ||| Sbjct 2395644 TGTTTCAGTAATGTCTTTGTGGCCAGCCGATTGGAGAGTGTGGTTTATGCATCATGGAGT 2395585 Query 107925 AGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCA-GAGCTCAGTGCCA--TGG 107981 | || || |||||||| ||||| ||| | ||| ||| | | | ||||| | ||| Sbjct 2395584 CGGGTTCAGGCTGACCTCAACTGCATGAAGGAC---CTCTATGCAATGAGTGCAAACTGG 2395528 Query 107982 AAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTC 108041 |||||||| | ||| || || | || || || || || ||||| || || ||| Sbjct 2395527 AAGTACTTGATAAATCTTTGTGGTATGGATTTTCCTATTAAAACCAACCTAGAAATTGTC 2395468 Query 108042 CTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGA---GGTACCTTCTGAG 108098 | |||||| |||| | ||| | ||||| |||| | || | | || || | Sbjct 2395467 AGGAAGCTCAAGTTGTTAATGGGAGAAAACAGCCTGGAAACGGAGAGGATGCCATCCCA- 2395409 Query 108099 TCCaaaaaaaaTCGCTGGAAATACCGCTATGAGG---------------TGACAGACACA 108143 ||| || | | |||||| | || ||||||| ||||| ||||| Sbjct 2395408 --TAAAGAAGAAAGGTGGAAAAAGCGGTATGAGGTCGTTAATGGAAAGCTGACAAACACA 2395351 Query 108144 CTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGG 108203 | || ||| || | ||||| | || | ||| | || | || Sbjct 2395350 GGG------ACTGTCAAAAT---GCTTCCTCCGCTCGAAA---CACCGCTTTTTTCTGGC 2395303 Query 108204 AATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAA-ATC 108262 | |||||| ||||||| | | | | | ||| |||| || | || || ||| Sbjct 2395302 AGTGCCTACTTTGTGGTCAGTAGGGAGTATGTGGGGTATGTACTACAGAATGAAAACATC 2395243 Query 108263 CCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCAC 108322 | |||| | | || |||| ||||||| || ||||| || || | ||||||||||| Sbjct 2395242 CAAAAG-TTTATGGAGTGGGCGCAAGACACATACAGCCCTGATGAGTATCTCTGGGCCAC 2395184 Query 108323 CCTTCAGCGTGCTCCGTGGA-TGCCTGGCTCTGTTCCTAGCCA-CCCCAAGTATCACATC 108380 | | ||| | | | | || | | || ||||| || || |||| || ||||| | | Sbjct 2395183 CATCCAGAG-GATTCCTGAAGTCCCGGGCTCACTTTCT-GCCAGCCATAAGTACGATTTG 2395126 Query 108381 TCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGC 108440 || |||||| || | |||||| | ||||||||||| ||| || || ||||| | Sbjct 2395125 TCTGACATGCAAGCAGTTGCCAGGTTTGTCAAGTGGCAATACTTTGAAGGTGATGTTTCC 2395066 Query 108441 ATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGG 108500 | ||| || || || | |||||| |||| |||| | | | | ||||||| || Sbjct 2395065 AAGGGTGCCCCCTACCCTCCCTGCGATGGAGTCCACGTGCGCTCGGTGTGCATTTTTGGA 2395006 Query 108501 GCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 || || ||| || ||||||| || | || || ||| | || || || ||||||||| Sbjct 2395005 GCTGGTGACTTGAACTGGATGCTGCGCAAACACCACTTGTTTGCCAATAAGTTTGAC 2394949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348214380932154