Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq8034 253 2e-62 seq9112 226 3e-54 seq11434 141 9e-29 seq9712 111 2e-19 >seq8034 Length=1360500 Score = 253 bits (280), Expect = 2e-62 Identities = 325/448 (73%), Gaps = 0/448 (0%) Strand=Plus/Plus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 || ||||| || || | || ||||||||||| || | ||||||||||| || |||||| Sbjct 970928 AGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGT 970987 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 || | |||||||| | || ||||||| ||||||||| || | ||| ||||| | || Sbjct 970988 TCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 971047 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || || ||||||||||| || || || ||||||||||| |||| | ||||| ||| | Sbjct 971048 AAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAG 971107 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 | || | ||||| | ||||| ||||| || | || || || | | || | Sbjct 971108 GTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167 Query 14426 ATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 14485 || |||||||| ||||| || | | |||| | ||||| | | | | ||| || ||| Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCA 971227 Query 14486 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAA 14545 ||||| | |||||||||||||| |||||||||||||| || || || || ||||| ||| Sbjct 971228 ATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 971287 Query 14546 CATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACT 14605 || | ||||||| || || ||| | ||||| || |||| |||||||| ||| Sbjct 971288 CAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 971347 Query 14606 ATACCATCACTAGCTGCAAAAAATGCCA 14633 || ||||| || |||||||| || |||| Sbjct 971348 ATGCCATCGCTTGCTGCAAAGAAAGCCA 971375 >seq9112 Length=1254116 Score = 226 bits (250), Expect = 3e-54 Identities = 517/774 (67%), Gaps = 12/774 (2%) Strand=Plus/Minus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTG-TTAGAAATAACGCCCATTTT 13914 || || ||| |||| || | |||| ||| || | || | || || | || ||||| | Sbjct 511598 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGATTCGACACCACTCCCATCCT 511540 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 ||||| || | ||||| || ||||||||||| || ||| |||||| ||||| || Sbjct 511539 CTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGT-----CTTTCAGTGAAATATTCTC 511485 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 |||||| |||||||| || | | || || || | |||| ||||| | Sbjct 511484 CATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG-- 511427 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 ||| || || | ||||||| ||||| ||||| | |||||||| || || || || Sbjct 511426 TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTT 511367 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 ||||| | | || | ||||| | |||||| ||||| | | | || | Sbjct 511366 CACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCATTGATAATTCTTTC 511307 Query 14155 CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 14214 | || | || | || | | || || || || || | || |||||| | Sbjct 511306 TCTTATTCTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCAAAACC 511247 Query 14215 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 14274 ||| || | |||||||||| |||||||||||| || ||||| || | || ||||||| Sbjct 511246 ACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAG 511187 Query 14275 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 14334 ||||||||| || | ||| ||||| | || || | || ||||||| | || || | Sbjct 511186 TCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCGC 511130 Query 14335 TGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCT 14394 || |||||| ||| | ||||| ||| | | ||| ||||| | ||||| | Sbjct 511129 TGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCAA 511070 Query 14395 AGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC 14454 ||||| || | || || || | | || ||| |||||||| ||||| || | ||| Sbjct 511069 GGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATTC 511010 Query 14455 CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 14514 | | ||||| | | | ||||| || |||||||| || ||||||||| |||| ||||| Sbjct 511009 CCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTAT 510950 Query 14515 GTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGA 14574 ||||||||| || || || || ||| | ||||| | ||||||| | || || ||| Sbjct 510949 GTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTTG 510890 Query 14575 GTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14628 | | ||| || |||| ||| |||| ||||| |||||||| ||| |||| || Sbjct 510889 GCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAA 510836 >seq11434 Length=1819511 Score = 141 bits (156), Expect = 9e-29 Identities = 293/431 (68%), Gaps = 5/431 (1%) Strand=Plus/Plus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 || ||||| | ||| || | |||||||| || ||||||||||| || |||||||| | Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 14323 || ||||||| |||| |||| | | ||| ||||| || || || || |||||||| Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941 Query 14324 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14383 | | || ||| ||||| ||| | ||||||||| | | | ||||||| Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001 Query 14384 ATCCATTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14442 ||||| | || |||| | | || || || | | | | |||||| |||| ||||| Sbjct 312002 ATCCAACA-CAAGACCCAAACTGCCTTCTTCTTGACACAGGC-ATTGTTCCAATGGCATT 312059 Query 14443 AAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 14502 || | | |||| | ||||| || | ||||| ||| ||||||| | |||| || Sbjct 312060 GAAGAGAAATTCCCTTTCTTTGTTATCTTTAATGTGTGT--CAATAAGGAGACTATTTAT 312117 Query 14503 TTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14562 ||||| ||||||||||| |||| || || || ||||| || || | ||||| Sbjct 312118 GTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAAT 312177 Query 14563 TTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGC 14622 || | ||| |||| ||| |||| ||||||| ||||| ||||||| ||||| Sbjct 312178 CTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGC 312237 Query 14623 AAAAAATGCCA 14633 ||| || |||| Sbjct 312238 AAAGAAAGCCA 312248 >seq9712 Length=6868699 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| || |||||||| || |||||||| | || ||||||| ||||||||| | Sbjct 3777325 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 3777384 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||| ||||| | || || || || |||||||| || || || ||||||||||| | Sbjct 3777385 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 3777444 Query 14346 CTATTAATCGTTCTCC 14361 ||| | ||||| || Sbjct 3777445 CTACAACACGTTCACC 3777460 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13914 || || ||| |||| || | |||| ||| || | || | | || || || ||||| | Sbjct 3775171 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 3775229 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 ||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| || Sbjct 3775230 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTC 3775289 Query 13975 CATAAAATCAAATGGATT 13992 |||||| |||||||| || Sbjct 3775290 CATAAAGTCAAATGGGTT 3775307 Score = 86.0 bits (94), Expect = 6e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 ||||| || |||||||| | |||||||||||||| |||||||||||||| || || || Sbjct 3788509 ATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 3788568 Query 14534 AAACCATAAAAACATCTAGCTTCTG 14558 || ||||| ||||| | ||||||| Sbjct 3788569 AAGCCATAGAAACAGCGGGCTTCTG 3788593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482268298088280