Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq3414 104 2e-17
seq3503 89.7 4e-13
seq11934 82.4 6e-11
seq5491 82.4 6e-11
>seq3414
Length=2822291
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || || ||||| || ||||||||||| | | || | ||||
Sbjct 171822 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 171881
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || || || || || ||| | ||||||||||||
Sbjct 171882 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCC 171941
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|||| ||| || | | | | ||||||| |||||| |||| ||||||| |
Sbjct 171942 TGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTC 172001
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|||||||||| || || || || || ||||||||
Sbjct 172002 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 172036
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || || || || || ||||||||||| | | || | ||||
Sbjct 171366 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 171425
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || || || || || ||| | |||||| |||||
Sbjct 171426 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCT 171485
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | ||| || | | | | ||||||| |||||| |||| ||||||| |
Sbjct 171486 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTC 171545
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||||| || || ||||| || |||||
Sbjct 171546 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 171577
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || || || || || ||||||||||| | | || | ||||
Sbjct 171594 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 171653
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || ||||| ||| |||| || || || || || ||| | |||||| |||||
Sbjct 171654 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCC 171713
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | ||| || | | | | ||||||| |||||| ||| | ||||||| |
Sbjct 171714 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 171773
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||||||| || || || || || |||||
Sbjct 171774 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 171805
>seq3503
Length=2845972
Score = 89.7 bits (98), Expect = 4e-13
Identities = 168/246 (68%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 18086 TTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGA 18143
||| |||| ||| | | || || ||||| | || | ||||| || || || ||||||
Sbjct 460279 TTCCTTTTCTTAGCACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGA 460338
Query 18144 ATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTT 18203
|| |||||||| | || || | |||||||| ||| ||||| ||| |||| ||||||
Sbjct 460339 ATATTGTAGTCAGACAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTT 460398
Query 18204 TGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTG 18263
|| ||||| || | ||||||||||| || | ||| || | | | | ||
Sbjct 460399 TGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTA 460458
Query 18264 TCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGC 18323
|| ||| || || | ||||||| | || || || | ||||| || ||||| |||
Sbjct 460459 TCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGC 460518
Query 18324 ATTTTT 18329
||||||
Sbjct 460519 ATTTTT 460524
>seq11934
Length=6643911
Score = 82.4 bits (90), Expect = 6e-11
Identities = 108/149 (72%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 18086 TTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGA 18143
||| |||| ||| | | || || ||||| | || | ||||| || || || ||||||
Sbjct 5736077 TTCCTTTTCTTAGCACCACCACGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGA 5736018
Query 18144 ATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTT 18203
|| |||||||| | || || | |||||||| ||| ||||| ||| |||| ||||||
Sbjct 5736017 ATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTT 5735958
Query 18204 TGTTGATCCACGGGCACGCCTTCCTTATC 18232
|| ||||| || | |||||||||||
Sbjct 5735957 TGCTGATCAGGAGGAATTCCTTCCTTATC 5735929
>seq5491
Length=6255621
Score = 82.4 bits (90), Expect = 6e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||| || || || ||||| || ||||||||||| | || || | |||||||| ||
Sbjct 1751716 GTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTG 1751775
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
|| || ||| |||| || || || || || || | |||||||||||| || |
Sbjct 1751776 CTTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTT 1751835
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
| |||||| | | | ||||| | ||||||| || | ||||||| | ||||| ||
Sbjct 1751836 TGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGT 1751895
Query 18302 CAATGTTTTTACAAAAATTTGCATT 18326
|| || || || || || ||||||
Sbjct 1751896 CAGGGTCTTCACGAAGATCTGCATT 1751920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379284725247645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |