Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq8034 255 5e-63
seq9112 214 2e-50
seq11434 156 4e-33
seq9712 116 3e-21
seq4492 114 1e-20
seq6514 93.3 4e-14
>seq8034
Length=1360500
Score = 255 bits (282), Expect = 5e-63
Identities = 437/629 (69%), Gaps = 15/629 (2%)
Strand=Plus/Plus
Query 11591 TCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAA 11650
|||| |||||| |||| | ||||| ||||| | || ||||||||||| ||||||
Sbjct 970907 TCCTCTGATGGTTTGTGTACCAGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAA 970966
Query 11651 CCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttt 11710
|| || ||||| || || |||||| | |||||||| | || ||||||| |||||||||
Sbjct 970967 CCCTCATCTCTGCTGATAAGTTCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTC 971026
Query 11711 tttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAAT 11770
|| | ||| ||||| | ||||| ||||| |||||||| || || ||||| || |||||
Sbjct 971027 TTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAG 971086
Query 11771 GCTACTACTCTTTCTCCATA--TA-CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCA 11827
||||| || | ||| ||||| || ||| ||| ||||| |||||||||
Sbjct 971087 GCTACGACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCT 971146
Query 11828 GCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTT--AAATAAATGCATTTTTTCTA 11885
|| ||||| || || || ||| ||||| || || || | | |||| | |||||
Sbjct 971147 GCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAATTC--CCTTTCTT 971204
Query 11886 TATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCA 11945
| |||| ||| || || || || | | |||||||||||| ||||| || |||||||
Sbjct 971205 TGGGATCTTTTAGGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCA 971264
Query 11946 TAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATC 12005
| || ||||| || ||||||||||| || || |||| | ||| || || |||||
Sbjct 971265 TGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATC 971324
Query 12006 TTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTT 12065
||| | || || |||||||| || ||||| || | |||||| || || || | |||
Sbjct 971325 GCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGCTGCAAAGAAAGCCAGAACATGGA 971384
Query 12066 TTATAAAGTATTTTTC----GTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGAT 12121
|||||| ||| | || | ||| || | ||||| | | | || || ||
Sbjct 971385 ATATAAAATATCTCTCCTCGGGCTTCAGGGA----TTCCCAGTGCTGAATGTCCTTGGAC 971440
Query 12122 AAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATA 12181
| || || || || ||||||| || ||| | | | |||||||| | |||||||
Sbjct 971441 AGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATCTGCCAGATA 971500
Query 12182 TCATGATACTTAATAGGGAAAATAACGAA 12210
|| || |||| || ||||| || || ||
Sbjct 971501 TCGTGGTACTCGATGGGGAAGATGACAAA 971529
>seq9112
Length=1254116
Score = 214 bits (236), Expect = 2e-50
Identities = 503/753 (67%), Gaps = 25/753 (3%)
Strand=Plus/Minus
Query 11308 ATTCTCTTCTTTATTTGTAAACACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGA 11366
||||||| | ||| | | ||| |||||| | ||||| || | |||| || | || |
Sbjct 511572 ATTCTCTGTTGGATTCGACACCACTCCCATCCTCTGATACTCCTTTACTC-TCTTCTCAA 511514
Query 11367 AAAAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATATACAT 11426
| || || ||||| | ||||| |||| |||||||||| ||| || || | |||
Sbjct 511513 AGAAGTTCGTCTTTC-----AGTGAAATATTCTCCATAAAGTCAAATGGGTTCTCTACTC 511459
Query 11427 TGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACT 11486
|||| || || | |||| | || | | ||| ||||| || | || || || |
Sbjct 511458 TGAAAACCTTGCTAAAACCCAGTTCCGGCATG--TCTGTCTGCCACAGACTCAATGTATT 511401
Query 11487 GAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACT 11546
| ||||| | |||||||| || || || | ||| || | || | || | || |
Sbjct 511400 GCTTCATTAGAGTGCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCAGTGAGGAATT 511341
Query 11547 CCTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGAT 11606
||| |||||| ||| |||| || ||| | |||| |||| |||| |
Sbjct 511340 CCTGTTCTATCCGAACAGCATTGATAATTCTTTCTCTTATTCTCTCCTCCAGTGGTTTGT 511281
Query 11607 GTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTA 11666
|| | || || ||||| | || |||||| |||| |||||||| || |||| ||| |
Sbjct 511280 GTGCCAGGTGATTGAACATCAGGCAAGCAAAACCACAGTGTAAACCCTCATCTCCACTAA 511221
Query 11667 TTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAG 11726
| |||||||| ||||| || | || ||||||| ||||||||| || | ||| ||||| |
Sbjct 511220 TAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCG 511161
Query 11727 CAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTC 11786
||||| ||||||||||| || || ||| | | ||||| |||| || | ||| |
Sbjct 511160 ATGCAAAATAACCAGAAAAG---ATGCCTTCCGCTGTAGCAAAGACTACAACACGTTCCC 511104
Query 11787 CATA------TACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTA 11840
|||| | | |||| | | ||||| | ||||||||| || ||||| || |
Sbjct 511103 CATAGGTAGCTGCTTTGTCCCCA---ATCCAGTGCAAGGCCCAATCTGCCTTCTTCTTGA 511047
Query 11841 CGCATTCCATTGTTTCTATAGCGTTAAA--TAAATGCATTTTTTCTATATTATCTCTTAC 11898
| || ||| ||||| || || || || |||| | ||||| | |||| |||
Sbjct 511046 CACAAGGCATCGTTTCAATGGCATTGAAGCGAAATTC--CCTTTCTTTGGGATCTTTTAT 510989
Query 11899 ATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAA 11958
|| || || || | |||||||||||| | ||||| || |||||||| || ||||| ||
Sbjct 510988 GTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTATGTTTTCCATGGCAATTTGGAA 510929
Query 11959 TCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATT 12018
||| ||||||| || || |||| ||| || || | ||| ||| | || ||
Sbjct 510928 GCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTTGGCTACATCGCTCCACCAAGTT 510869
Query 12019 CTCATTTACAATACCATCACTAGATGCAAAAAA 12051
||||||| || |||||||| | | |||| ||
Sbjct 510868 TGCATTTACTATGCCATCACTTGCTACAAAGAA 510836
>seq11434
Length=1819511
Score = 156 bits (172), Expect = 4e-33
Identities = 317/463 (68%), Gaps = 16/463 (3%)
Strand=Plus/Plus
Query 11630 CACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAAT 11689
|| ||||| | ||| |||||||| || || || || || |||||||| |||||||| |
Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881
Query 11690 CCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAAT 11749
|| ||||||| |||| |||| | | ||| ||||| ||||| ||||||||||||||
Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941
Query 11750 ATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCAT--ATA----CCTTGTTGCTA 11803
| | ||||| ||||| ||| | || | |||||||| || | ||||| | |
Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001
Query 11804 GATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCG 11863
||||| | ||||| | || ||||| || || || ||||||| | || ||
Sbjct 312002 ---ATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACA-GGCATTGTTCCAATGGCA 312057
Query 11864 TT--AAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTAT 11921
|| | | |||| | ||||| | |||||| ||| || ||| || || | | |||||
Sbjct 312058 TTGAAGAGAAATTC--CCTTTCTTTGTTATCT-TTA-ATGTGTGTCAATAAGGAGACTAT 312113
Query 11922 ACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTG 11981
|| || ||||| || ||||| |||| ||||| || |||||||| || | ||||
Sbjct 312114 TTATGTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTG 312173
Query 11982 AACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAG 12041
| ||| | || | |||| |||| | || || |||| ||| || ||||||| |
Sbjct 312174 TAATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATG 312233
Query 12042 ATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC 12084
|||||| || || || |||| |||||| ||| |||| ||
Sbjct 312234 CTGCAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTC 312276
>seq9712
Length=6868699
Score = 116 bits (128), Expect = 3e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || |||||||| |||||||| | || ||||||| ||||||||| ||
Sbjct 3777327 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 3777386
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| ||| ||||| | ||||| |||||||||||||| || || ||||| || ||||| |||
Sbjct 3777387 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 3777446
Query 11774 ACTACTCTTTCTCC 11787
|| || | ||| ||
Sbjct 3777447 ACAACACGTTCACC 3777460
>seq4492
Length=3487830
Score = 114 bits (126), Expect = 1e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711
|||| ||||| || || |||||||| ||||| || | ||| ||||| | |||| || |
Sbjct 1722499 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 1722558
Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771
||| ||| |||||||||||||| || || || ||||| ||||| || ||||| ||||| |
Sbjct 1722559 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1722618
Query 11772 CTACTACTCTTTCTCC 11787
| || |||||||| ||
Sbjct 1722619 CCACCACTCTTTCCCC 1722634
>seq6514
Length=2016651
Score = 93.3 bits (102), Expect = 4e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197
|||||||| ||||| || || ||||| | ||||| || ||||| || || |||||||||
Sbjct 1876206 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 1876147
Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257
||||||||||| | | || |||| || || || |||||||| || || || || |
Sbjct 1876146 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1876087
Query 37258 CTATTTCTCAATCCAT 37273
|| ||||| | ||||
Sbjct 1876086 CTGTTTCTTATACCAT 1876071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468449713044240
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