Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq8034 140 2e-28 seq9112 91.5 1e-13 seq11434 82.4 5e-11 >seq8034 Length=1360500 Score = 140 bits (154), Expect = 2e-28 Identities = 397/598 (66%), Gaps = 43/598 (7%) Strand=Plus/Minus Query 22345 ATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGAT 22404 ||||| |||||||| | || || || ||||||| ||||||||||| || | || Sbjct 971490 ATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGGAC 971431 Query 22405 GTACGCCATTGGACAGAAAAACTGA---CCGAGGCTGAGCGCAGGTTCATGTCTCACATA 22461 | | || ||| ||| |||| |||||| || | || || | || | Sbjct 971430 ATTCAGCACTGG---GAATCCCTGAAGCCCGAGG---AGAGATATTTTATATTCCATGTT 971377 Query 22462 CTGGCATTCTTTGCAATGGCA---GATGGCATTGTAGGCGACAACCTTGTGT-GCAATTT 22517 ||||| ||||||||| ||| |||||||| ||| || ||| | ||| || |||| Sbjct 971376 CTGGCTTTCTTTGCA---GCAAGCGATGGCATAGTAAATGAAAACTTGGTGGAGCGATTT 971320 Query 22518 CGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAAT 22577 || || ||| || | ||| |||||||| | ||||||||| || || | || || Sbjct 971319 AGCCAA-GAAGTTCAG---ATTACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCAT 971264 Query 22578 GGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAG-- 22635 |||||| |||||| |||||||||||| || || ||| ||| | || ||||| Sbjct 971263 GGAAAACATACATTCTGAAATGTATAGTCTTCTTATTGACACTTACCTA---AAAGATCC 971207 Query 22636 --AATCAAGCCGCATTGTTTTCA--GCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGC 22691 || ||| || | |||| || |||| ||||| ||||| || ||||| Sbjct 971206 CAAAGAAAGGGAATTTCTCTTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGC 971147 Query 22692 ACAGTGGGC--TGCACAATGGCTGAAT--GCCACACATAAGT---CTATCGCAACACGTC 22744 | | ||||| ||| |||| || | ||| | | | |||| | | |||| Sbjct 971146 AGATTGGGCCTTGC------GCTGGATTGGGGACAAAGAGGCTACCTATGGTGA-ACGTG 971094 Query 22745 TCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCT 22804 || | |||||||| || || |||||| || | ||||| || || ||||| | ||||||| Sbjct 971093 TCGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCT 971034 Query 22805 GGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTG 22864 |||| |||||||| || ||||| || | | ||||||| || | || ||| | | Sbjct 971033 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAGTGAACTTATCAGCAGAG 970974 Query 22865 ACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922 | || ||| |||||||||| |||||||| || |||| | || ||| | ||||||| Sbjct 970973 ATGAGGGTTTACACTGTGATTTTGCTTGCCTGATGTTCAAACACCTGGTACACAAACC 970916 >seq9112 Length=1254116 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 22773 CATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGG 22832 ||| |||||||| | ||||| | ||||||||||| |||||||| || ||||| || Sbjct 511138 CATCTTTTCTGGTTATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGG 511197 Query 22833 GTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 | | |||||||| || | ||||| | || || ||| ||||||||| |||||||| Sbjct 511198 CCTCACCTTTTCCAATGAACTTATTAGTGGAGATGAGGGTTTACACTGTGGTTTTGCTTG 511257 Query 22893 TATGCTGTTTAGGCAAATGGCAAACAAACC 22922 || |||| | || ||||| ||||||| Sbjct 511258 CCTGATGTTCAATCACCTGGCACACAAACC 511287 >seq11434 Length=1819511 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || ||| || | | |||||||| || ||||| ||||||||||| Sbjct 311964 GCCTTTGCCCTAGTGGAAAGCACCTTCTTTTCTGGTTCTTTTGCACTGATATTCTGGCTC 311905 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 | ||||| || ||||| || | | |||||||| || | |||||| |||| || Sbjct 311904 AGGAAACAAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGTGATGAG 311845 Query 22870 GGTCTACACTGTGACTTTGCTTG 22892 ||| |||||||| |||||||||| Sbjct 311844 GGTTTACACTGTTACTTTGCTTG 311822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356177936384863