Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq8034 253 2e-62 seq9112 237 2e-57 seq11434 150 2e-31 seq9712 114 1e-20 >seq8034 Length=1360500 Score = 253 bits (280), Expect = 2e-62 Identities = 325/448 (73%), Gaps = 0/448 (0%) Strand=Plus/Plus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 || ||||| || || | || ||||||||||| || | ||||||||||| || |||||| Sbjct 970928 AGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGT 970987 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 || | |||||||| | || ||||||| ||||||||| || | ||| ||||| | ||| Sbjct 970988 TCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 971047 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || || ||||||||||| || || || ||||||||||| |||| | ||||| ||| | Sbjct 971048 AAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAG 971107 Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093 | || | ||||| | ||||| ||||| || | || || || | | || | Sbjct 971108 GTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167 Query 14094 ATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 14153 || |||||||| ||||| || | | ||||| | ||||| | | | | ||| || ||| Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCA 971227 Query 14154 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAG 14213 ||||| | |||||||||||||| |||||||||||||| || || || || ||||| || Sbjct 971228 ATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 971287 Query 14214 CATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACT 14273 || | ||||| | || ||||| | ||||| || |||| |||||||| ||| Sbjct 971288 CAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 971347 Query 14274 ATACCATCACTAGCTGCAAAAAATGCCA 14301 || ||||| || |||||||| || |||| Sbjct 971348 ATGCCATCGCTTGCTGCAAAGAAAGCCA 971375 >seq9112 Length=1254116 Score = 237 bits (262), Expect = 2e-57 Identities = 522/777 (67%), Gaps = 18/777 (2%) Strand=Plus/Minus Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTG-TTAGAAATAACGCCCATTTT 13582 || || ||| |||| || | |||| ||| || | || | || || | || ||||| | Sbjct 511598 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGATTCGACACCACTCCCATCCT 511540 Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642 ||||| || | ||||| || ||||||||||| || ||| |||||| ||||| || Sbjct 511539 CTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGT-----CTTTCAGTGAAATATTCTC 511485 Query 13643 CATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 13702 |||||| |||||||| || | | || || || | |||| ||||| | Sbjct 511484 CATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG-- 511427 Query 13703 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13762 ||| || || | | ||||||| ||||| ||||| | |||||||| || || || || Sbjct 511426 TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTT 511367 Query 13763 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAAT 13822 ||||| | | || | ||||| | |||||| ||||| | | ||||| | Sbjct 511366 CACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCAT---TGATAATTCT 511310 Query 13823 TG---TAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879 | | || |||| | || | | || || || || || | || ||||| Sbjct 511309 TTCTCTTATTCTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCAAA 511250 Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939 | |||| || | |||||||||| |||||||||||| || ||||| || | || ||||| Sbjct 511249 ACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCAT 511190 Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999 || ||||||||| || | ||| ||||| | ||||| | || ||||||| | || || Sbjct 511189 CAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTC 511133 Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14059 ||| |||||| ||| | ||||| ||| | | ||| ||||| | ||||| | Sbjct 511132 CGCTGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTG 511073 Query 14060 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATA 14119 ||||| || | || || || | | || ||| |||||||| ||||| || | | Sbjct 511072 CAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAA 511013 Query 14120 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14179 |||| | ||||| | | | ||||| || |||||||| || ||||||||| |||| || Sbjct 511012 TTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATG 510953 Query 14180 TATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC 14239 |||||||||||| || || || || ||| | || || | ||||| | | || ||||| Sbjct 510952 TATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTC 510893 Query 14240 CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14296 | | ||| || |||| ||| |||| ||||| |||||||| ||| |||| || Sbjct 510892 TTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAA 510836 >seq11434 Length=1819511 Score = 150 bits (166), Expect = 2e-31 Identities = 295/431 (68%), Gaps = 5/431 (1%) Strand=Plus/Plus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || ||||| | ||| || | |||||||| || ||||||||||| || |||||||| | Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991 || ||||||| |||| |||| | | ||| ||||| ||||| || || |||||||| Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941 Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14051 | | || ||| ||||| ||| | ||||||||| | | | ||||||| Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001 Query 14052 ATCCATTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14110 ||||| | || |||| | | || || || | | | ||||||| |||| ||||| Sbjct 312002 ATCCA-ACACAAGACCCAAACTGCCTTCTTCTTGA-CACAGGCATTGTTCCAATGGCATT 312059 Query 14111 AAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 14170 || | | ||||| | ||||| || | |||| ||| |||||||| | |||| || Sbjct 312060 GAAGAGAAATTCCCTTTCTTTGTTATCTTTAATG--TGTGTCAATAAGGAGACTATTTAT 312117 Query 14171 TTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCA 14230 ||||| ||||||||||| |||| || || || ||||| ||||| | ||| | Sbjct 312118 GTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAAT 312177 Query 14231 TTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGC 14290 || | ||| |||| ||| |||| ||||||| ||||| ||||||| ||||| Sbjct 312178 CTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGC 312237 Query 14291 AAAAAATGCCA 14301 ||| || |||| Sbjct 312238 AAAGAAAGCCA 312248 >seq9712 Length=6868699 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 |||||||||| || |||||||| || |||||||| | || ||||||| ||||||||| | Sbjct 3777325 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 3777384 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | ||| ||||| | ||||| || || |||||||| || || || ||||||||||| | Sbjct 3777385 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 3777444 Query 14014 CTATTAATCGTTCTCC 14029 ||| | ||||| || Sbjct 3777445 CTACAACACGTTCACC 3777460 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13582 || || ||| |||| || | |||| ||| || | || | | || || || ||||| | Sbjct 3775171 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 3775229 Query 13583 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13642 ||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| || Sbjct 3775230 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTC 3775289 Query 13643 CATAAAATCAAATGGATT 13660 |||||| |||||||| || Sbjct 3775290 CATAAAGTCAAATGGGTT 3775307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479651117591400