Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq8034 241 1e-58
seq9112 215 5e-51
seq11434 138 1e-27
seq9712 111 2e-19
>seq8034
Length=1360500
Score = 241 bits (266), Expect = 1e-58
Identities = 396/567 (70%), Gaps = 8/567 (1%)
Strand=Plus/Plus
Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701
|| ||||| || || | || ||||||||||| || | ||||||||||| || ||||||
Sbjct 970928 AGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGT 970987
Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761
|| | |||||||| | || ||||||| ||||||||| || | ||| ||||| | ||
Sbjct 970988 TCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 971047
Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821
|| || ||||||||||| || || || ||||||||||| |||| | ||||| ||| |
Sbjct 971048 AAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAG 971107
Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881
| || | ||||| ||||| ||||| || | || || || | | || |
Sbjct 971108 GTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167
Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 13941
|| ||||| || |||||||| | | |||| | ||||| | | | | ||| || |||
Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCA 971227
Query 13942 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAA 14001
||||| | |||||||||||||| ||||||||||| || || || || || ||||| |||
Sbjct 971228 ATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 971287
Query 14002 CATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACA 14061
|| | ||||||| || || || | ||||| || ||||||||||||| ||
Sbjct 971288 CAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 971347
Query 14062 ATACCATCACTAGCTGCAAAAAATGCC--AATATGTTTTTAATAAAGTATTGCTCTTCAT 14119
|| ||||| || |||||||| || ||| || ||| | ||||| ||| ||| ||
Sbjct 971348 ATGCCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAAT--ATAAAATATCTCTCCTCGG 971405
Query 14120 TGTTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCA 14177
|| || || ||| | ||| || ||||| || || || || || || | |||||
Sbjct 971406 GCTTCAGGGATTCCCAGT--GCTGAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCA 971463
Query 14178 AAAACTAGCGACAGCTTTTTTATACAT 14204
|| ||| | || || ||||||||
Sbjct 971464 GAAGGAAGCCTCCGCCTTCTTATACAT 971490
>seq9112
Length=1254116
Score = 215 bits (238), Expect = 5e-51
Identities = 517/775 (67%), Gaps = 14/775 (2%)
Strand=Plus/Minus
Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTG-TTAGAAATAACGCCCATTTT 13370
|| || ||| |||| || | |||| ||| || | || | || || | || ||||| |
Sbjct 511598 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGATTCGACACCACTCCCATCCT 511540
Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430
||||| || | ||||| || ||||| ||||| || ||| |||||| ||||| ||
Sbjct 511539 CTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGT-----CTTTCAGTGAAATATTCTC 511485
Query 13431 CATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAATAA 13490
|||||| || ||||| || | | || || || | |||| ||||| |
Sbjct 511484 CATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG-- 511427
Query 13491 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13550
||| || || | | ||||||| ||||| ||||| | |||||||| || || || ||
Sbjct 511426 TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTT 511367
Query 13551 TACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAA- 13609
||||| | | ||| | ||||| | |||||| ||||| | | | || |
Sbjct 511366 CACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCATTGATAATTCTTTC 511307
Query 13610 TCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAAT 13669
||||| | | || | || | | || || || || || | || ||||||
Sbjct 511306 TCTTATTC-TCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCAAAAC 511248
Query 13670 CACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCA 13729
|||| || | |||||||||| |||||||||||| || ||||| || | || |||||||
Sbjct 511247 CACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCA 511188
Query 13730 ATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAA 13789
||||||||| || | ||| ||||| | || || | || ||||||| | || ||
Sbjct 511187 GTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCG 511131
Query 13790 CTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTC 13849
||| |||||| ||| | ||||| ||| | | ||| ||||| ||||| |
Sbjct 511130 CTGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCA 511071
Query 13850 TAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTT 13909
||||| || | || || || | | || ||| ||||| || |||||||| | ||
Sbjct 511070 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATT 511011
Query 13910 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 13969
|| | ||||| | | | ||||| || |||||||| || ||||||||| |||| ||||
Sbjct 511010 CCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTA 510951
Query 13970 TGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCG 14029
||||||| || || || || || ||| | ||||| | ||||||| | || || ||
Sbjct 510950 TGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTT 510891
Query 14030 AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAA 14084
| | ||| || |||||||| |||| || || |||||||| ||| |||| ||
Sbjct 510890 GGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAA 510836
>seq11434
Length=1819511
Score = 138 bits (152), Expect = 1e-27
Identities = 292/431 (68%), Gaps = 5/431 (1%)
Strand=Plus/Plus
Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719
|| ||||| | ||| || | |||||||| || ||||||||||| || |||||||| |
Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881
Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779
|| ||||||| |||| |||| | | ||| ||||| || || || || ||||||||
Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941
Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839
| | || ||| ||||| ||| | ||||||||| | | | ||||||
Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001
Query 13840 ATCCATTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898
||||| | || |||| | | || || || | | | ||||||| | || |||||
Sbjct 312002 ATCCA-ACACAAGACCCAAACTGCCTTCTTCTTGA-CACAGGCATTGTTCCAATGGCATT 312059
Query 13899 GAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 13958
||| | | |||| | ||||| || | |||| ||| |||||||| | |||| ||
Sbjct 312060 GAAGAGAAATTCCCTTTCTTTGTTATCTTTAATG--TGTGTCAATAAGGAGACTATTTAT 312117
Query 13959 TTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14018
||||| |||||||||||| |||| || || || ||||| || || | |||||
Sbjct 312118 GTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAAT 312177
Query 14019 TTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGC 14078
|| | || |||| ||| |||||||||||| || || ||||||| |||||
Sbjct 312178 CTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGC 312237
Query 14079 AAAAAATGCCA 14089
||| || ||||
Sbjct 312238 AAAGAAAGCCA 312248
>seq9712
Length=6868699
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||||||||| || |||||||| || |||||||| | || ||||||| ||||||||| |
Sbjct 3777325 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 3777384
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||| | || || || || |||||||| || || || ||||||||||| |
Sbjct 3777385 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 3777444
Query 13802 CTATTAGTCGTTCTCC 13817
||| | ||||| ||
Sbjct 3777445 CTACAACACGTTCACC 3777460
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13370
|| || ||| |||| || | |||| ||| || | || | | || || || ||||| |
Sbjct 3775171 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 3775229
Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430
||||| || | ||||| || ||||| |||||||| || ||||||||||| ||||| ||
Sbjct 3775230 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTC 3775289
Query 13431 CATAAAATCGAATGGATT 13448
|||||| || ||||| ||
Sbjct 3775290 CATAAAGTCAAATGGGTT 3775307
Score = 82.4 bits (90), Expect = 7e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989
||||| || |||||||| | |||||||||||||| ||||||||||| || || || ||
Sbjct 3788509 ATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 3788568
Query 13990 AAACCATAAAAACATCTAGCTTCTG 14014
|| ||||| ||||| | |||||||
Sbjct 3788569 AAGCCATAGAAACAGCGGGCTTCTG 3788593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478512100162440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |