Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8034 147 3e-30 >seq8034 Length=1360500 Score = 147 bits (162), Expect = 3e-30 Identities = 385/581 (66%), Gaps = 15/581 (3%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 || |||||| ||| || || || ||| | ||||| || ||||| |||| ||||| ||| Sbjct 971520 TTCCCCATCGAGTACCACGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGG 971461 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | ||| ||||| || |||||||||||| | | | ||||| | | | | || Sbjct 971460 ACCGCCGAGGAGGTGGACCTGTCCAAGGACATTCAGCACTGGGAATCCCTGAAGCCCGAG 971401 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| || | ||||||| || || |||| |||||||| | |||||| || || Sbjct 971400 ---GAGAGATATTTTATATTCCATGTTCTGGCTTTCTTTGCAGCAAGCGATGGCATAGTA 971344 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || || || || ||||| ||||| ||| | ||| |||| | || || Sbjct 971343 AATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAG-ATTACAGAAGCCCGCTGTTT 971285 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 || || |||||||| || || ||| | || || |||||||| | || ||||| Sbjct 971284 CTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTTCTTATTGA 971225 Query 125297 CATGTACATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGC 125355 || ||| | ||||| ||| | || || ||||| || || || || ||| ||| Sbjct 971224 CACTTACCTAAAAGATCC-CAAAGAAAGGGAATTTCTCTTCAATGCCATTGAAACGATGC 971166 Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGT 125415 | | | | || ||||| | |||| | || ||||| | ||| | || || | | Sbjct 971165 CTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCTACCT 971106 Query 125416 ACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTG 125475 | | || | | || || || || || || || |||||||||||||| ||| ||||| Sbjct 971105 ATGGTGAACGTGTCGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTG 971046 Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535 | | || || ||||||||||| || ||||| ||||| || || |||| | | ||| Sbjct 971045 CATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCT----CACATTTTCCAGT 970990 Query 125536 ----TTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 |||| |||| ||||| |||||||||| ||||| Sbjct 970989 GAACTTATCAGCAGAGATGAGGGTTTACACTGTGATTTTGC 970949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740940435999960