Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq8034 241 1e-58 seq9112 230 2e-55 seq4492 102 7e-17 seq9712 82.4 7e-11 >seq8034 Length=1360500 Score = 241 bits (266), Expect = 1e-58 Identities = 414/598 (69%), Gaps = 10/598 (2%) Strand=Plus/Plus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 || || || ||||||| || |||||||||||||| || || |||||||| || || || Sbjct 970928 AGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGT 970987 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 || | |||||||| || || ||||| || |||||||| || | ||| ||||| | ||| Sbjct 970988 TCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 971047 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312 || ||||| ||||| || || ||||| ||||| ||||| |||| | | ||||||||| Sbjct 971048 AAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAG 971107 Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372 ||| | ||| | | ||||| |||||| | ||| || | || || || | Sbjct 971108 GTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167 Query 13373 ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT 13432 || |||| || || || || | | | | |||| || ||| | ||||| || Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCA 971227 Query 13433 ATCAATAAG-CTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAA 13491 || || ||| ||||||||||| ||||| || |||||||| || |||||||| ||||| || Sbjct 971228 AT-AAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAA 971286 Query 13492 ACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAAC 13551 ||| | || |||| | ||||||||| | ||||| || | |||||||| || || Sbjct 971287 ACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTAC 971346 Query 13552 TATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC----GT 13607 ||| || || || || ||||| ||||| || | || ||||| | | | || | Sbjct 971347 TATGCCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATCTCTCCTCGGG 971406 Query 13608 TTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCC 13667 ||| | | | ||| | ||| || || || | || |||||||| |||||| Sbjct 971407 CTTCAGGGA----TTCCCAGTGCTGAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCC 971462 Query 13668 AAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725 | || ||||| | ||||||||||||||| ||| ||||| | || | ||||| || Sbjct 971463 AGAAGGAAGCCTCCGCCTTCTTATACATCTGCCAGATATCGTGGTACTCGATGGGGAA 971520 >seq9112 Length=1254116 Score = 230 bits (254), Expect = 2e-55 Identities = 569/855 (67%), Gaps = 30/855 (4%) Strand=Plus/Minus Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922 ||||| || | ||||| || ||||| ||||| || |||| | |||||||| ||| Sbjct 511538 TGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTCAGT-----GAAATATTCTCC 511484 Query 12923 ATAAAATCGAAAGGATTTT----TCGAACAATAGTATTTTTTACACCCTAATTCTAGTAA 12978 ||||| || || || || | || | || || || | || | ||| | | Sbjct 511483 ATAAAGTCAAATGGGTTCTCTACTCTGAAAACC----TTGCTAAAACCCAGTTCCGGCAT 511428 Query 12979 CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAA 13038 |||||| || ||| |||| ||||| || ||||||| | || ||||| || || | Sbjct 511427 G--TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAG 511370 Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTAT 13098 || ||||||| || || || | || | | |||||| ||| || | ||||| | | Sbjct 511369 CTTCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCATTGATAATTCT 511310 Query 13099 GTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGCAAA 13158 ||||||||| | ||| | ||| | || || || || ||||||| || ||||| Sbjct 511309 TTCTCTTATTCTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCAAA 511250 Query 13159 ATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT 13218 | ||||||| || || ||||||| ||| || || || || ||||| || || || ||||| Sbjct 511249 ACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCAT 511190 Query 13219 AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTC 13278 || |||||||| || | ||| ||||| | ||||| |||| ||||| | | ||||| Sbjct 511189 CAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTC 511133 Query 13279 AACTGCTGCAAACGCTATCAAC-CTTTCACCATACGTA-CTATTTTTACTCTCTATCCAC 13336 ||| ||||| ||| |||| | ||| ||||| ||| || ||| | | | ||||| Sbjct 511132 CGCTGTAGCAAAGACTA-CAACACGTTCCCCATAGGTAGCTGCTTTGTCCC-CAATCCAG 511075 Query 13337 TTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAA 13396 | |||||| | ||| || | || || || ||| |||| || || || || | Sbjct 511074 TGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGA 511015 Query 13397 TAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAA 13456 | | |||| || ||| || ||||| || || | || ||||||||| | ||| Sbjct 511014 AATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAA 510955 Query 13457 TGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACT 13516 || || |||||||| || |||||||| ||| | ||||| | || |||| ||||||||| Sbjct 510954 TGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACT 510895 Query 13517 TCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaa 13576 || | | ||| || | |||||| | || ||||| || ||||| || |||| ||| Sbjct 510894 TCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAA 510835 Query 13577 GCAAGTATGTGCTTAATAAAttttttttC----GTTTTCTGACAACTTTAACCAATCTGG 13632 | || | || | ||| | | | || | ||| | | | ||| | Sbjct 510834 ACCAGAACATGGGATAGAAAATCTCTCTCCTCGGGCTTCAGGGA----TTCCCAGTGCCA 510779 Query 13633 AAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692 || || || || | || |||||||| ||||||| || ||||| | ||||||||||| Sbjct 510778 AATGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATA 510719 Query 13693 CATCATCCATATATC 13707 |||| ||| ||||| Sbjct 510718 CATCTGCCAGATATC 510704 >seq4492 Length=3487830 Score = 102 bits (112), Expect = 7e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232 |||||||||| || || || || || ||||| || || || |||||||| |||| || | Sbjct 1722499 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 1722558 Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292 | | ||| |||||||||||||| || || || || || |||||||| || || ||||| | Sbjct 1722559 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1722618 Query 13293 CTATCAACCTTTCACC 13308 | | || ||||| || Sbjct 1722619 CCACCACTCTTTCCCC 1722634 Score = 93.3 bits (102), Expect = 4e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922 ||||| || ||||| ||| ||||| || ||||||||||||||||| ||||| |||||| Sbjct 1711315 TGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 1711374 Query 12923 ATAAAATCGAAAGGATTTT 12941 |||||||| |||||||||| Sbjct 1711375 ATAAAATCAAAAGGATTTT 1711393 >seq9712 Length=6868699 Score = 82.4 bits (90), Expect = 7e-11 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 13421 ATATAAGTATCTATCAATAAG-CTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 || ||||| || || || ||| ||||||||||| ||||| || |||||||| || ||||| Sbjct 3788509 ATGTAAGTGTCAAT-AAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 3788567 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 ||| ||||| ||||| | || |||| | ||||||||| Sbjct 3788568 GAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 3788606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430915056441042