Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq8034 241 1e-58
seq9112 230 2e-55
seq4492 102 7e-17
seq9712 82.4 7e-11
>seq8034
Length=1360500
Score = 241 bits (266), Expect = 1e-58
Identities = 414/598 (69%), Gaps = 10/598 (2%)
Strand=Plus/Plus
Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192
|| || || ||||||| || |||||||||||||| || || |||||||| || || ||
Sbjct 970928 AGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGT 970987
Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252
|| | |||||||| || || ||||| || |||||||| || | ||| ||||| | |||
Sbjct 970988 TCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 971047
Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312
|| ||||| ||||| || || ||||| ||||| ||||| |||| | | |||||||||
Sbjct 971048 AAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAG 971107
Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
||| | ||| | | ||||| |||||| | ||| || | || || || |
Sbjct 971108 GTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 971167
Query 13373 ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT 13432
|| |||| || || || || | | | | |||| || ||| | ||||| ||
Sbjct 971168 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCA 971227
Query 13433 ATCAATAAG-CTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAA 13491
|| || ||| ||||||||||| ||||| || |||||||| || |||||||| ||||| ||
Sbjct 971228 AT-AAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAA 971286
Query 13492 ACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAAC 13551
||| | || |||| | ||||||||| | ||||| || | |||||||| || ||
Sbjct 971287 ACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTAC 971346
Query 13552 TATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC----GT 13607
||| || || || || ||||| ||||| || | || ||||| | | | || |
Sbjct 971347 TATGCCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATCTCTCCTCGGG 971406
Query 13608 TTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCC 13667
||| | | | ||| | ||| || || || | || |||||||| ||||||
Sbjct 971407 CTTCAGGGA----TTCCCAGTGCTGAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCC 971462
Query 13668 AAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725
| || ||||| | ||||||||||||||| ||| ||||| | || | ||||| ||
Sbjct 971463 AGAAGGAAGCCTCCGCCTTCTTATACATCTGCCAGATATCGTGGTACTCGATGGGGAA 971520
>seq9112
Length=1254116
Score = 230 bits (254), Expect = 2e-55
Identities = 569/855 (67%), Gaps = 30/855 (4%)
Strand=Plus/Minus
Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922
||||| || | ||||| || ||||| ||||| || |||| | |||||||| |||
Sbjct 511538 TGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTCAGT-----GAAATATTCTCC 511484
Query 12923 ATAAAATCGAAAGGATTTT----TCGAACAATAGTATTTTTTACACCCTAATTCTAGTAA 12978
||||| || || || || | || | || || || | || | ||| | |
Sbjct 511483 ATAAAGTCAAATGGGTTCTCTACTCTGAAAACC----TTGCTAAAACCCAGTTCCGGCAT 511428
Query 12979 CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAA 13038
|||||| || ||| |||| ||||| || ||||||| | || ||||| || || |
Sbjct 511427 G--TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAG 511370
Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTAT 13098
|| ||||||| || || || | || | | |||||| ||| || | ||||| | |
Sbjct 511369 CTTCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCATTGATAATTCT 511310
Query 13099 GTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGCAAA 13158
||||||||| | ||| | ||| | || || || || ||||||| || |||||
Sbjct 511309 TTCTCTTATTCTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCAAA 511250
Query 13159 ATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCAT 13218
| ||||||| || || ||||||| ||| || || || || ||||| || || || |||||
Sbjct 511249 ACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCAT 511190
Query 13219 AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTC 13278
|| |||||||| || | ||| ||||| | ||||| |||| ||||| | | |||||
Sbjct 511189 CAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTC 511133
Query 13279 AACTGCTGCAAACGCTATCAAC-CTTTCACCATACGTA-CTATTTTTACTCTCTATCCAC 13336
||| ||||| ||| |||| | ||| ||||| ||| || ||| | | | |||||
Sbjct 511132 CGCTGTAGCAAAGACTA-CAACACGTTCCCCATAGGTAGCTGCTTTGTCCC-CAATCCAG 511075
Query 13337 TTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAA 13396
| |||||| | ||| || | || || || ||| |||| || || || || |
Sbjct 511074 TGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGA 511015
Query 13397 TAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAA 13456
| | |||| || ||| || ||||| || || | || ||||||||| | |||
Sbjct 511014 AATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAA 510955
Query 13457 TGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACT 13516
|| || |||||||| || |||||||| ||| | ||||| | || |||| |||||||||
Sbjct 510954 TGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACT 510895
Query 13517 TCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaa 13576
|| | | ||| || | |||||| | || ||||| || ||||| || |||| |||
Sbjct 510894 TCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAA 510835
Query 13577 GCAAGTATGTGCTTAATAAAttttttttC----GTTTTCTGACAACTTTAACCAATCTGG 13632
| || | || | ||| | | | || | ||| | | | ||| |
Sbjct 510834 ACCAGAACATGGGATAGAAAATCTCTCTCCTCGGGCTTCAGGGA----TTCCCAGTGCCA 510779
Query 13633 AAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATA 13692
|| || || || | || |||||||| ||||||| || ||||| | |||||||||||
Sbjct 510778 AATGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATA 510719
Query 13693 CATCATCCATATATC 13707
|||| ||| |||||
Sbjct 510718 CATCTGCCAGATATC 510704
>seq4492
Length=3487830
Score = 102 bits (112), Expect = 7e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232
|||||||||| || || || || || ||||| || || || |||||||| |||| || |
Sbjct 1722499 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 1722558
Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292
| | ||| |||||||||||||| || || || || || |||||||| || || ||||| |
Sbjct 1722559 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1722618
Query 13293 CTATCAACCTTTCACC 13308
| | || ||||| ||
Sbjct 1722619 CCACCACTCTTTCCCC 1722634
Score = 93.3 bits (102), Expect = 4e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922
||||| || ||||| ||| ||||| || ||||||||||||||||| ||||| ||||||
Sbjct 1711315 TGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 1711374
Query 12923 ATAAAATCGAAAGGATTTT 12941
|||||||| ||||||||||
Sbjct 1711375 ATAAAATCAAAAGGATTTT 1711393
>seq9712
Length=6868699
Score = 82.4 bits (90), Expect = 7e-11
Identities = 79/99 (80%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 13421 ATATAAGTATCTATCAATAAG-CTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479
|| ||||| || || || ||| ||||||||||| ||||| || |||||||| || |||||
Sbjct 3788509 ATGTAAGTGTCAAT-AAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 3788567
Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518
||| ||||| ||||| | || |||| | |||||||||
Sbjct 3788568 GAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 3788606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430915056441042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |