Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq1936 116 3e-21
seq6158 113 4e-20
seq5392 105 6e-18
>seq1936
Length=760985
Score = 116 bits (128), Expect = 3e-21
Identities = 117/152 (77%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933
|| ||||| || ||||| || | ||||||||||| ||||||||| |||| |||||||||
Sbjct 748038 GGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGATG 747979
Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993
|| || || || || |||| || |||||||| ||||| || ||||| ||||| || ||
Sbjct 747978 CCCCAAGCTGAGAACCACGACCCAGACATCAAGGAGCATGTGAACTCCCTGGGGGAGAAT 747919
Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025
|| || || || | || | ||||| |||||
Sbjct 747918 CTGAAGACCCTCAGGCTGAGGCTGCGGCGCTG 747887
Score = 82.4 bits (90), Expect = 7e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 129104 AGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACATAGAATCATACAT 129163
|||||| ||||| |||||||| ||||| ||||| |||||||||||||||||| | |||||
Sbjct 745642 AGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACATAGAAGCCTACAT 745583
Query 129164 GAC 129166
|||
Sbjct 745582 GAC 745580
>seq6158
Length=9241946
Score = 113 bits (124), Expect = 4e-20
Identities = 196/285 (69%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 5239 TCCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTG 5298
|||||| ||||| || ||| || | |||||||| ||||| | ||| |||
Sbjct 4167034 TCCGGTGGAACCAAAACCACCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACAACTTC 4167093
Query 5299 AACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAAC 5358
| | |||| | | || |||||||| || ||||| || || | || ||||| || ||
Sbjct 4167094 TATTTCTGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACCCTTTTTGAC 4167153
Query 5359 CTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTC 5418
||||| | || || || |||||||| || || || ||||| |||| || |||||
Sbjct 4167154 TTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAATCTTC 4167213
Query 5419 GTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGC 5478
| || || ||||| || || || ||||||||||| | || | ||| || |||| ||
Sbjct 4167214 ATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGACTGTGGAGC 4167273
Query 5479 TATGCGTCCGTAGCAACCAGGTGGGAGCTTTATCAGAAGGTCAGT 5523
|| | ||| || || |||| |||||| |||| ||| ||| ||
Sbjct 4167274 TACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTCCGT 4167318
>seq5392
Length=2524750
Score = 105 bits (116), Expect = 6e-18
Identities = 176/253 (70%), Gaps = 1/253 (0%)
Strand=Plus/Minus
Query 5272 GGTGTCGTCCAAGCGGTTAACCTCTTGAACTGCTGGGTGCGATATGCGTTCGCATATTAG 5331
|||||| ||||| | ||| |||| | | | || | | || |||||||| || ||
Sbjct 2267096 GGTGTCATCCAAAGCTTGAACTTCTTCTATTTCCGGATAAAAAATTCGTTCGCAAATGAG 2267037
Query 5332 CTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCAC 5391
||| || || | || | ||| || || ||||| | || || ||||||||||| ||
Sbjct 2267036 CTGTGCAATTCGATCACACTTTTTGACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTAC 2266977
Query 5392 CACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTG 5451
|| || ||||| |||| || ||||| || || || ||||| || || || ||||||||
Sbjct 2266976 AACACCAACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTG 2266917
Query 5452 -TTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCAGGTGGGAGCTTTA 5510
|||| || | ||| || |||| |||| | ||| || || |||| |||||| ||
Sbjct 2266916 TTTTGCAAGCCAAGCCTGACTGTGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTA 2266857
Query 5511 TCAGAAGGTCAGT 5523
|| ||| ||| ||
Sbjct 2266856 TCTGAATGTCCGT 2266844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447678642401520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |