Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3359 114 1e-20 seq5491 111 1e-19 seq3414 109 5e-19 seq11879 96.9 3e-15 seq4303 96.9 3e-15 seq3503 96.9 3e-15 seq6158 87.8 2e-12 seq3525 87.8 2e-12 seq3381 84.2 2e-11 >seq3359 Length=286138 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || |||||||||| ||||| || || || || || | ||| || || Sbjct 33451 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 33392 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| ||||||||||| ||| |||| || | | ||||| || || || Sbjct 33391 AGAGTGCAGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 33332 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | |||||| || |||||| | | |||||| | | | | | Sbjct 33331 ATACCCTCCTTGTCTTGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTTGCCC 33272 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 |||| |||||||||| || | || || |||||||||||||||||| || Sbjct 33271 TCAAGGTTGATGGTTTTGCCCGGGAGGGTCTTCACAAAGATCTGCATGTTT 33221 >seq5491 Length=6255621 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| |||||| ||||||| | || ||||| || |||||||| ||||| || Sbjct 1751764 ATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTT 1751823 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || ||||||||||| ||| ||||| | | ||||| || | ||||| Sbjct 1751824 ATCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGAT 1751883 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || ||||| || || ||||| ||||||||||| Sbjct 1751884 GGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1751919 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || || || ||||| |||| |||||||||| ||| || || || || | ||| || Sbjct 1756754 TTAGACACCCCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTA 1756813 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 || || ||| ||| ||||||||||| || ||||||| || || ||||| || Sbjct 1756814 GTCAGACAGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTC 1756873 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 ||||| || ||||| ||||| | || ||||||||||| Sbjct 1756874 AGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGAC 1756912 >seq3414 Length=2822291 Score = 109 bits (120), Expect = 5e-19 Identities = 170/242 (70%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 94766 TTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGC 94825 |||| | || ||| || || |||| |||| |||| ||||| || || ||||| || Sbjct 171337 TTAAGAATTAACAG-CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGG 171395 Query 94826 ACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 | ||| || || | |||| | ||| |||||||| || || ||||||| | || Sbjct 171396 ATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTC 171455 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||| || || || || |||||||| || | || || ||||| || ||| ||| Sbjct 171456 TGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTG 171515 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | | || || |||| |||||||| || || || || || ||||||||||||||| Sbjct 171516 TCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGC 171575 Query 95006 AT 95007 || Sbjct 171576 AT 171577 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||| |||| ||||| || || || || || | ||| || || Sbjct 171807 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 171866 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || || ||| Sbjct 171867 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 171926 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| || || | ||||| ||||| || ||| |||||| | | || || Sbjct 171927 ATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 171986 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| |||||||| || || || || || ||||| ||||||||||| Sbjct 171987 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 172033 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| |||| |||| ||||| || || ||||| || | ||| || || Sbjct 171579 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 171638 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 171639 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 171698 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || |||||||| || | || || ||||| || ||| |||||| | | || || Sbjct 171699 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 171758 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || || ||||| ||||||||||| Sbjct 171759 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 171805 >seq11879 Length=1036973 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||||||||||||||| ||| ||| || | ||||| || || || ||||| || || Sbjct 346018 ATCCTCCAGCTGTTTGCCGGCAAGTATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTT 346077 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | |||||| || ||||| | | |||||| | | | ||| |||| ||||| Sbjct 346078 GTCTTGAATTTTGGCTTTGACATCCTCATTGGTGTCACTGGGCTTGACCTCAAGAGTGAT 346137 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || ||||| || ||||||||||||||||| Sbjct 346138 GGTCTTGCCCGTAAGTGTCTTCACAAAGATCTGCAT 346173 >seq4303 Length=4886142 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | |||||| |||||||| || || || || ||| Sbjct 2814795 TCTCAACACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCAGACAAAGTCCGTCC 2814736 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||| || || || ||||||| | |||||||||||| |||||||| ||||| || Sbjct 2814735 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 2814676 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| || | | || || | | | || || || | ||||| Sbjct 2814675 CTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGAT 2814616 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || ||||| |||||||| || |||||||| Sbjct 2814615 GGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2814580 >seq3503 Length=2845972 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| || | |||||| |||||||| | || || || || ||| ||| |||| Sbjct 460313 CAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCGTCCATCTTCCA 460372 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 | || || || ||||||| | |||||||||||| |||||||| ||||| || || | | Sbjct 460373 GTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGA 460432 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || ||||| || | | || || | | | || || || | |||||||| || | Sbjct 460433 TCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCC 460492 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| |||||||| || |||||||| Sbjct 460493 CCGTAAGGGTTTTCACGAAAATCTGCAT 460520 >seq6158 Length=9241946 Score = 87.8 bits (96), Expect = 2e-12 Identities = 202/299 (68%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 43615 CTTCCAGTTCAGGGTAAGATATCTTTTCACAAATGAGCTGGGCGATTCTGTCTCCCTGCA 43674 |||| | ||| || ||| | ||| ||| ||||||||||| || |||| || |||| Sbjct 4167090 CTTCTATTTCTGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACCCTTTT 4167149 Query 43675 GCACGTAAAAAGTGTGCTTATCGTGGTTGAATAGCACCACGCCCACGTTTCCCCTATAGT 43734 || | ||| | | || | || || || || || || || ||||| ||||| | Sbjct 4167150 TGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATAAT 4167209 Query 43735 CTTCGTCTATTACGCCCGCGCCTACGTCTATTCCGTGACGTACTGCCAAGCCTGATCTG- 43793 |||| | ||| || || || ||||| || || ||| | | ||||||||||| ||| Sbjct 4167210 CTTCATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGA-CTGT 4167268 Query 43794 GCGGCCACCCTGCCATAATGTCCGTGAGGCACGGCTACCCGTATGTCCGTTTTTACGAG- 43852 | || || || |||||| || ||| | |||| | | ||||||||||| || || Sbjct 4167269 GGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTCCGTTTTCACAAGA 4167328 Query 43853 GCTGTAGCCTTTGGGTTCTATGGCCAAATCTTGGGCGCTGTACAGATCGTACCCGGCGG 43911 ||| | || | ||| ||| | |||| | ||| |||||||| ||||| || |||| Sbjct 4167329 GCTTTCTCC-ATAGGTGGTATTGTGTAATCATAGGCACTGTACAGGTCGTAGCCCGCGG 4167386 >seq3525 Length=3185992 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| |||| || || || || || | ||||||||| | ||||| | |||||| Sbjct 2397048 CACCACCTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAAAGAGTGTGGCCATCCTC 2396989 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || |||||| || |||| || | ||||| || || || || || || ||||||| Sbjct 2396988 CAACTGTTTGCCCACAAATATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCATG 2396929 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || || ||||| | |||||| | | | ||| |||| ||||||||| | Sbjct 2396928 GATCTTGGCTTTGACATTTTCACTGGTGTCACTGGGCTGGACCTCAAAGGTGATGGTTCT 2396869 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || || || || ||| ||||||||||| Sbjct 2396868 TCCTGTGAGGGTCTTTACAGAGATCTGCATG 2396838 >seq3381 Length=5156926 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/216 (68%), Gaps = 11/216 (5%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | |||||| |||||||| | ||| || || ||| Sbjct 4775687 TCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAT--------- 4775737 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 | |||| || || || ||||||| | |||||||||||| |||||||| ||||| || Sbjct 4775738 --CTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 4775795 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| || | |||| | | || || |||| ||||| Sbjct 4775796 ATCCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGAT 4775855 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || ||||| |||||||| || |||||||| Sbjct 4775856 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 4775891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448219355731560