Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq8034 206 3e-48
seq4492 98.7 1e-15
seq9712 87.8 2e-12
seq11434 84.2 2e-11
>seq8034
Length=1360500
Score = 206 bits (228), Expect = 3e-48
Identities = 322/466 (69%), Gaps = 0/466 (0%)
Strand=Plus/Plus
Query 21461 TGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCA 21520
||||| ||||||| || ||||||||||| || ||||| ||||| || || || | ||||
Sbjct 970931 TGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGTTCA 970990
Query 21521 TTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAAT 21580
| |||||||| | || ||||| | ||||| || || | ||| ||||| || |||||
Sbjct 970991 CTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAA 971050
Query 21581 GCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTA 21640
| || |||||||| ||||| || || |||||||| || || | |||||||| || |||
Sbjct 971051 GAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAGGTA 971110
Query 21641 GATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATT 21700
| ||||| ||| ||||| ||||| | |||||| | || | |||| ||
Sbjct 971111 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATC 971170
Query 21701 GTATCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNN 21760
|| ||||| || || || ||| | |||| | ||| ||| |
Sbjct 971171 GTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCAATA 971230
Query 21761 NNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACAT 21820
||||||||||||||||||||| ||||| || || || || || || || |||||
Sbjct 971231 AGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAG 971290
Query 21821 CTTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATT 21880
| || |||| | ||||| || |||||| | |||||||||||||||||||
Sbjct 971291 CGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATG 971350
Query 21881 CCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATC 21926
||||| || || ||||| || |||| | || |||||||||||
Sbjct 971351 CCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATC 971396
>seq4492
Length=3487830
Score = 98.7 bits (108), Expect = 1e-15
Identities = 124/169 (73%), Gaps = 1/169 (1%)
Strand=Plus/Plus
Query 21100 TTTATTCAGCTTTATAAAAATAT-TTATTTAAAAATCAGCATCTAATGAGAAAACATTAT 21158
||||| || |||| || || | || |||||||||| ||||| || | ||| || ||||
Sbjct 1711226 TTTATAGAGTTTTAAAACAAGAGGTTTTTTAAAAATCTGCATCCAAGGTGAAGACGTTAT 1711285
Query 21159 CTTCtttttttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAAT 21218
|| ||| || ||||| | | | ||||| || ||||| ||| || || ||||
Sbjct 1711286 CTGTGGTTTCTGCCATAACTGCAAAACGCTGATACTCCGAAACTCGTTTCTCAAAGAAAT 1711345
Query 21219 TTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTC 21267
|||| |||||||| || || || ||||||||||||||| ||||||||
Sbjct 1711346 TTGTTTTTCCTTCTAAAGAAATGTTTTCCATAAAATCAAAAGGATTTTC 1711394
>seq9712
Length=6868699
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCC 21181
|| ||||| || |||||||| || | ||| ||| ||| | ||||||| | ||||
Sbjct 3775165 TTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCC 3775224
Query 21182 ATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA 21241
|| | ||||| || | ||||| || || || || || ||||||||||||| ||| |||
Sbjct 3775225 ATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATA 3775284
Query 21242 GATTCCATAAAATCAAATGGATTTTC 21267
|||||||| |||||||| || ||
Sbjct 3775285 TTCTCCATAAAGTCAAATGGGTTCTC 3775310
>seq11434
Length=1819511
Score = 84.2 bits (92), Expect = 2e-11
Identities = 290/455 (64%), Gaps = 3/455 (1%)
Strand=Plus/Plus
Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535
|| ||||| | ||| || ||||| ||||| || || || | |||||| |||||||| |
Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881
Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595
|| ||||| | |||| || | | ||| ||||| ||||| | || ||||||||
Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941
Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAAT 21655
||| || || ||||| || | | ||||| || | ||| ||||| | |
Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001
Query 21656 ATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTT 21715
||||| |||| |||||| | || | ||| || |||| |||| || ||
Sbjct 312002 ATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACAGGCA-TTGTTCCAATGGCATTG 312060
Query 21716 AAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATT 21775
|| ||| | |||| | ||| | ||| ||||| ||
Sbjct 312061 AAGAGAAATTCCCTTTCTTTGTTATCTTTAATGTGTGTCAATAAGGAG--ACTATTTATG 312118
Query 21776 TCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACAT 21835
||||||||||| |||||| | || || || || || || || || | |||| |
Sbjct 312119 TCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATC 312178
Query 21836 TGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895
|||| || | |||| ||| |||||||||||| |||||| ||||||| || |||
Sbjct 312179 TGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCA 312238
Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTC 21930
|| || |||| |||| ||||||||||| |||
Sbjct 312239 AAGAAAGCCAGAATATAGGATATAAAATATCTTTC 312273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531815556248040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |