Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq3414 105 5e-18
seq5491 87.8 1e-12
seq3359 84.2 2e-11
>seq3414
Length=2822291
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || | ||| |||| ||||| || |||||||| || ||||||||||| |
Sbjct 171579 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 171638
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || |||| || ||||| ||| | || |||| ||| ||||| ||
Sbjct 171639 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 171698
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| ||||| || || || || |||||| | | | ||||| | |||||||
Sbjct 171699 ATGCCTTCTTTATCCTGGATCTTGGC--CTTCACATTTTCGATGGTGTCACTGGGCTCCA 171756
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||||||||| || |||||||| || || || || ||||||||
Sbjct 171757 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 171805
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| || |||||||| || ||||||||||| | | || | | ||
Sbjct 171365 CAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATC 171424
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| ||||| || | ||| ||||| ||
Sbjct 171425 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATC 171484
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || |||||| | | | ||||| | ||||||| || | |||||||
Sbjct 171485 TTGGATCTTGGC--CTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 171542
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||||||| || || ||||| ||||||||
Sbjct 171543 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 171577
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || | ||| |||| ||||| || ||||| || || ||||||||||| |
Sbjct 171807 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 171866
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || |||| || ||||| ||| | || |||| ||| ||||| ||
Sbjct 171867 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 171926
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||| || || || |||| |||||| | | | ||||| | |||||||
Sbjct 171927 ATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 171986
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| | ||||||||| || |||||||| || || || || ||||||||||||
Sbjct 171987 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 172037
>seq5491
Length=6255621
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| |||||||| || || ||||||||||| | || ||| | || |||| ||
Sbjct 1751717 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 1751776
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
|| || ||| | || |||| ||| ||||| ||| | ||| || || || || |||
Sbjct 1751777 TTTCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTT 1751836
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | ||||||| |||||| || | ||||||||| || || |
Sbjct 1751837 GC--CTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAG 1751894
Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936
|||| || || || || |||||||||
Sbjct 1751895 TCAGGGTCTTCACGAAGATCTGCATT 1751920
>seq3359
Length=286138
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| ||||| |||||||| || || ||||||||||| |
Sbjct 33451 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 33392
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || |||| |||||||| ||| | || || ||||| ||||| ||
Sbjct 33391 AGAGTGCAGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 33332
Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| ||||| ||||| ||| || || | | | ||||| | |||||
Sbjct 33331 ATACCCTCCTTGTCTTGAATTTTGGCT--TTGACGTTCTCAATGGTGTCACTGGGCTTGC 33274
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| | | |||||||||| || | || || || ||||| |||||||| ||
Sbjct 33273 CCTCAAGGTTGATGGTTTTGCCCGGGAGGGTCTTCACAAAGATCTGCATGTT 33222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405024702594790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |