Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3913 122 6e-23 seq3503 113 3e-20 seq4303 111 1e-19 seq3002 111 1e-19 seq2836 109 4e-19 seq1425 109 4e-19 seq470 104 2e-17 seq3414 102 5e-17 seq11934 100 2e-16 seq3214 87.8 1e-12 seq7746 84.2 1e-11 seq5225 84.2 1e-11 >seq3913 Length=5448691 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 2959780 AAGCCAGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 2959839 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 2959840 TTATCCATTCATGCGCGTCACTAATTAGATGACGA 2959874 >seq3503 Length=2845972 Score = 113 bits (124), Expect = 3e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 ||| || | ||||||||| |||||||||||||||||| ||||||||| ||| | || Sbjct 460308 CAAAACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCGTCCATC 460367 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 460368 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 460427 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||||| |||||| || | || || || Sbjct 460428 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 460487 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || ||||| | |||||||||||| |||||||| ||| Sbjct 460488 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTT 460524 >seq4303 Length=4886142 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||| ||||||| ||||||||| ||| | || Sbjct 2814792 CAACACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCAGACAAAGTCCGTCCATC 2814733 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 2814732 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTCTC 2814673 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||||| |||||| || | || || || Sbjct 2814672 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 2814613 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||||||||| |||||||| || Sbjct 2814612 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2814577 >seq3002 Length=4620727 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 ||||| | ||||||||| |||||||||||| ||| | ||||||||| |||| |||| Sbjct 2620219 CAACAAAAGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCGTC 2620278 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| | || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 2620279 TTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 2620338 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | |||||| |||||| || | || ||||| Sbjct 2620339 CTGGATCTTGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGT 2620398 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||| | | |||||||||||| |||||||| || Sbjct 2620399 CTTCCCCCTTAGGGTTTTCACGAAAATCTGCATTTT 2620434 >seq2836 Length=447263 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||| ||| ||||| || |||||||| Sbjct 194344 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAATAGGTAGGGACAGTGGGAATCTCGT 194285 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||| || || ||||||||||||||| Sbjct 194284 TCATCCATTCATGTGCATCGCTAATTAGATGACGA 194250 >seq1425 Length=462631 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||| ||||||||||||||| ||| |||||||| ||||| || |||||||| Sbjct 26434 AAGCCCGTTTCCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 26375 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||| |||| || Sbjct 26374 TCATCCATTCATGCGCGTCACTAATTAAATGATGA 26340 >seq470 Length=1611892 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||| ||||||||||||||||||| ||| |||| ||| ||||| || |||||||| Sbjct 1271663 AAGCCTGTTCCCTTGGCTGTGGTTTTGCTGGATATTAGGTAGGGACAGTGGGAATCTCGT 1271604 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| ||||||||||||||||| || Sbjct 1271603 TCATCCATTCATGCACGTCACTAATTAGATGATGA 1271569 >seq3414 Length=2822291 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| ||||| |||| || || || |||||| || || ||||| |||| Sbjct 171577 TACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 171636 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | || || || ||||| || || | || || |||| || Sbjct 171637 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGG 171696 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||||||| ||| || || ||||||||| | || || || | || | Sbjct 171697 GGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCA 171756 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || || || || || |||| ||| |||||||| |||||||| Sbjct 171757 CTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 171805 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| |||| |||| || || || ||| || || || ||||| |||| Sbjct 171805 TACCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAG 171864 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | || || || ||||| || || | || || |||| || Sbjct 171865 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGG 171924 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| || ||| ||||| ||||||||| | || || || | || | Sbjct 171925 GAATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCA 171984 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | || | || || || || || |||| ||| |||||||| |||||||| || Sbjct 171985 CCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 172036 >seq11934 Length=6643911 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||||||||| ||||||||| |||| | || Sbjct 5736048 CAACACGAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 5735989 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | ||| ||||| | || | ||||| || || Sbjct 5735988 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 5735929 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || | ||| ||||| | | ||||| |||| | || | || || || Sbjct 5735928 CTGGATCTCGGCCTTTACATTTTATATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGT 5735869 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTG 38314 || ||||| | |||||||| ||| ||||| Sbjct 5735868 CTTCCCCGTAAGGGTTTTCATGAAAATCTG 5735839 >seq3214 Length=3208335 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| ||||||||||| ||| |||||||||||||| ||||||||| |||| | || Sbjct 1956893 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 1956834 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || | | || || | | || | ||||| || | Sbjct 1956833 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATTCCTTCCTTAAC 1956774 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | | ||||| |||||| || | || || || Sbjct 1956773 CTGGATCTTGGCCTTTACATTTTATATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 1956714 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||| ||||||| |||||||| || Sbjct 1956713 CTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 1956678 >seq7746 Length=1950873 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | ||||||||| |||||||||||||||||| ||||||||| | | | || Sbjct 468108 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCATGCATC 468167 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || | ||| ||| | | || | ||||| || || Sbjct 468168 TTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAGGAATTCCTTCCTTATC 468227 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || | ||| ||||| | | ||||| |||||| || | || || || Sbjct 468228 CTGGATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACATCGAGGGTGATGGT 468287 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||||| ||| |||||||| || Sbjct 468288 CTT-CCCGTAAGGGTTTTCATGAAAATCTGCATTTT 468322 >seq5225 Length=4237731 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 |||||||||||||||||||| |||||||||| | ||||| |||| |||| |||||| || Sbjct 1974179 TCTCTCTTCAAAGTTCTTTTTAACTTTCCCTTATGGTACGTGTTGACTATTGGTCTCACG 1974238 Query 20008 GTAATATTTAGCCTTA 20023 | ||||||||| || Sbjct 1974239 CCAGTATTTAGCCATA 1974254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334894862511251