Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8034 340 2e-88 seq9112 288 1e-72 seq11434 197 2e-45 seq6514 123 3e-23 seq9712 111 2e-19 seq4492 111 2e-19 seq9934 82.4 1e-10 >seq8034 Length=1360500 Score = 340 bits (376), Expect = 2e-88 Identities = 435/599 (73%), Gaps = 3/599 (1%) Strand=Plus/Plus Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 ||||| ||||||| || || ||||| ||||||| |||||| ||||| || || | ||| Sbjct 970931 TGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGTTCA 970990 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 ||||||| ||||| || ||||| || || || || || ||||| ||||| || ||||| Sbjct 970991 CTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAA 971050 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 32822 || || |||||||| || ||||| ||||| |||||||| | | | || ||||| | Sbjct 971051 GAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAGGTA 971110 Query 32823 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 32882 | | |||| ||||| |||||||| |||||||| || ||||||||||| Sbjct 971111 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATC 971170 Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942 || || || ||||| |||||| | | |||| || |||||| | || || ||||| Sbjct 971171 GTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCAATA 971230 Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCAT 33002 | ||||||||||||||| ||||| |||||||| ||||| ||||| || || ||||| || Sbjct 971231 AGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAG 971290 Query 33003 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33062 | || || |||||||| |||||| | |||||| || | || |||||||| ||||| Sbjct 971291 CGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATG 971350 Query 33063 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33122 || || || |||||||| || |||| ||||| |||||||||| | || || || | Sbjct 971351 CCATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATCTCTCCTCGGGCTTC 971410 Query 33123 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 33182 || | ||| | | || || || || | ||||| || || | ||||| || || Sbjct 971411 AGGGATTCCCAGTGCTGAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAA 971470 Query 33183 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 ||||| ||||| |||||||| | |||||| || || || | || || || || ||||| Sbjct 971471 GCCTCCGCCTTCTTATACATCTGCCAGATATCGTGGTACTCGATGGGGAAGATGACAAA 971529 >seq9112 Length=1254116 Score = 288 bits (318), Expect = 1e-72 Identities = 636/944 (67%), Gaps = 36/944 (4%) Strand=Plus/Minus Query 32314 TTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 32370 |||| |||||| |||| | | |||| ||| ||| | || |||| |||||||| Sbjct 511600 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGATTCGACACCACTCCCATCC 511541 Query 32371 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 32430 | || || || || | || || || || || || || | | ||| ||||| | Sbjct 511540 TCTGATACTCCTTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 511486 Query 32431 CCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 32490 |||| || || ||||| || || | ||| || |||| |||| ||| | || Sbjct 511485 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCGGCATG- 511427 Query 32491 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 32550 ||| ||||| ||| | || || ||| ||||| | |||||||| || || || | Sbjct 511426 -TCTGTCTGCCACAGACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 511368 Query 32551 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 32610 | || || | ||| |||| || ||||| ||||| || || || | | ||||| Sbjct 511367 TCACAGGCAAGGCCTCAGTGAGGAATTCCTGTTCTATCCGAACAGCAT---TGATAAT-- 511313 Query 32611 ATCTTACTGTT--TCTTCACTCG-GTGGATACAAT---AAATGTTTAAACATCAAACATG 32664 |||| || || ||| ||| |||| | | | || || ||||||| || | Sbjct 511312 -TCTTTCTCTTATTCTCTCCTCCAGTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAG 511254 Query 32665 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 32724 | ||| | ||||||| |||||| |||| |||||| | ||| |||||||| ||||| || | Sbjct 511253 CAAAACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAG 511194 Query 32725 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 32784 |||| || || || || || ||||| ||||| || ||||| | |||||||||| | | Sbjct 511193 GCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA---TGC 511137 Query 32785 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCC 32841 |||| ||| |||||| | | || | || ||||| | | || |||| |||| Sbjct 511136 CTTCCGCTGTAGCAAAGACTACAACACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCC 511077 Query 32842 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 32901 | | |||||||| |||||||| || ||||||||||| || || || ||||| ||| Sbjct 511076 AGTGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGC 511017 Query 32902 GATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCG 32961 || | | |||| || |||||| | || || ||||| | | |||||||||| | | Sbjct 511016 GAAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACATTCCAG 510957 Query 32962 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTA 33021 |||| |||||||| ||||| ||||| || || |||| || | || || || | ||| | Sbjct 510956 AATGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAA 510897 Query 33022 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 33081 ||||| | | |||| || | || ||| |||| ||||| || ||||| ||| |||| | Sbjct 510896 CTTCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTACAAAGA 510837 Query 33082 ACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG- 33140 | ||| ||||| || ||||| | | || || || | || ||||| || || Sbjct 510836 AAACCAGAACATGGGATAGAAAATCTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTGC 510781 Query 33141 ---ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197 || || || || | ||||| || ||| | ||||| || || || || ||||| ||| Sbjct 510780 CAAATGTCCTTGGACAGGTCCACCTCCTCCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTA 510721 Query 33198 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 ||||| | |||||| ||||| || | | || || || ||||| Sbjct 510720 TACATCTGCCAGATATCATGGTACTCGGTGGGGAAGATGACAAA 510677 >seq11434 Length=1819511 Score = 197 bits (218), Expect = 2e-45 Identities = 317/450 (70%), Gaps = 8/450 (2%) Strand=Plus/Plus Query 32673 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 32732 ||||||| |||||| || || ||||| | ||| |||||||| ||||| || ||||| || Sbjct 311834 CAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 311893 Query 32733 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 32792 || | || | ||||| ||||| ||||| || ||||||||||| | | ||| ||| Sbjct 311894 CCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAGGTGCTTTCCACT 311953 Query 32793 GCCGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGTCATGTATCC-ACTTTTG 32848 |||||||| || | ||||||| | | | ||| |||| || | Sbjct 311954 AGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCAATCCAACACAAG 312013 Query 32849 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 32908 | ||||| | |||||||| || |||| ||||||||| | || ||||| |||||| | | Sbjct 312014 A-CCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTCCAATGGCATTGAAGAGAAATTC 312071 Query 32909 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 32968 |||| || |||||||| || ||| ||||| | ||||||| || || ||||| || Sbjct 312072 CCTTTCTTTGTTATCTTTA--ATGTGTGTCAATAAGGAGACTATTTATGTCAGAATGTAT 312129 Query 32969 GTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGT 33028 |||||| | || ||||| || || |||||||| | || |||||||| | |||| Sbjct 312130 GTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATCTGAATTTCTTG 312189 Query 33029 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33088 | |||| |||| | || ||||||| ||||| || |||| |||||||| || |||| Sbjct 312190 AACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCAAAGAAAGCCAG 312249 Query 33089 TACATGTTTTATAAAATATTTTTCGTCTGG 33118 | || |||||||||| |||| || || Sbjct 312250 AATATAGGATATAAAATATCTTTCCTCAGG 312279 >seq6514 Length=2016651 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||||| Sbjct 1879054 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 1878995 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| |||||| |||||||| ||||| || || || || || ||||| || | || || | Sbjct 1878994 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 1878935 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | |||||||| | ||||||||||| | |||| | ||| || |||| Sbjct 1878934 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGATCATCAGGAA 1878884 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 1876206 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 1876147 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 1876146 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1876087 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 1876086 CTGTTTCTTATACCATA 1876070 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63130 ||||||||||| |||||||| |||||||||||||| | || |||||||||| | || Sbjct 1865434 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 1865375 Query 63131 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63190 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 1865374 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 1865315 Query 63191 TCCAAGTATATGGC 63204 |||| ||| || || Sbjct 1865314 TCCAGGTAAATAGC 1865301 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| |||||||||||||||| || || || || || || || || || | Sbjct 1844946 CACTGAACACTTTCTTTGTTTCTTTGTGTAAGTTAGAGACAGCAATCCTGGCTGCCAGGA 1844887 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 | ||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 1844886 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1844827 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || ||| | || | |||||||| || ||||| Sbjct 1844826 GTTCCACTGTGGTGACCCCACTGTACAAGCCTTGGATTACTTTCAT 1844781 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 ||||| | ||| | || | || || ||||| || | || |||||||| ||||||||| Sbjct 1851593 CTAGAAAGTTGTGGGCGGTTGGTACCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAAC 1851534 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63565 || | |||||||| ||||| || || ||||| |||| || || || || || || Sbjct 1851533 CACCTCTCAGAAAGAAGATTATATGTTTCAATTGCTGCATCAATGTCTTCTTTGTGGATC 1851474 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 || || | || | ||| ||||| || || ||||||||| Sbjct 1851473 CCAACAGATACTCTCATCAACATATGTTGTGGTCTTTCA 1851435 >seq9712 Length=6868699 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| || || | ||| |||||||| ||||| || ||||| || || || || | Sbjct 3777325 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 3777384 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| ||||| || ||||| || ||||||||||| || ||||| ||||| ||||||| Sbjct 3777385 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 3777444 Query 32803 C 32803 | Sbjct 3777445 C 3777445 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||| | || || ||||| | ||||||||||||||| ||||| |||||||| ||||| Sbjct 3788502 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 3788561 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||| || || ||||| || | || || |||||||| |||||| | |||||| || Sbjct 3788562 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 3788621 >seq4492 Length=3487830 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || ||||| || || | ||| |||||||| |||||||| ||||| || || | ||| || Sbjct 1722501 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1722560 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 1722561 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 1722619 >seq9934 Length=3345286 Score = 82.4 bits (90), Expect = 1e-10 Identities = 143/205 (70%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 30452 TTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATC 30511 ||| ||||||| | ||||||||| | || |||| | | || ||||| || |||| ||| Sbjct 135357 TTGAACTTCTTCTATTTCTGGATAGAACATCCGTTCACAAATGAGCTGTGCAATTCGATC 135416 Query 30512 CCCCGTATTT-ACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTC 30570 | ||||| || | || | ||| ||| ||||| | | || || ||||||| Sbjct 135417 ACGT-TATTTGACTTCAAACTTTTCTTTGCCAAAATTAAAGACTACAACACCAATATTTC 135475 Query 30571 CCCTATAATCTTCGTCTATTACACCGCCTCCTATAT---CAATGCCTTTTAGGGACAGAC 30627 | ||||||||||| ||| | ||||| |||||| || ||| | |||| | || | Sbjct 135476 CTCTATAATCTTCATCTGTGACACCAGCTCCTACATCTACAACGTGTTTTGCAGCCAAGC 135535 Query 30628 CAGACCTAGGAGCTATTCTACCATA 30652 |||||| ||||||| ||| ||||| Sbjct 135536 CAGACCATGGAGCTACTCTTCCATA 135560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633530452551600