Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq8034 291 9e-74 seq9112 221 1e-52 seq11434 123 3e-23 seq9712 105 7e-18 >seq8034 Length=1360500 Score = 291 bits (322), Expect = 9e-74 Identities = 469/669 (70%), Gaps = 4/669 (1%) Strand=Plus/Plus Query 93039 TTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098 ||||| ||||||| | || |||||| ||||| | | ||| |||| | ||| |||| Sbjct 970893 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACCAGGTGTTTGAACATCAGGCAAGCAA 970952 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTGAATGTTAAACCTGGT 93157 | || |||||||| || |||| || | || | ||| || ||||| | || || Sbjct 970953 AATCACAGTGTAAACCCTCATCTC-TGCTGATAAGTTCACTGGAAAATGTGAGGCCAGGC 971011 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217 | ||||||||||||||||||||| ||||| || |||||| ||| ||||| || || ||| Sbjct 971012 ATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCT 971071 Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCAT 93277 ||||| || ||||| || || | |||||| || | | || || | ||||| Sbjct 971072 TCCACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAG 971131 Query 93278 TTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337 || |||||||| || || ||||| | |||||| | ||||| || || || || || Sbjct 971132 CGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGA 971191 Query 93338 TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAA 93397 | || | || | | |||| || ||| || || || | ||| ||||||||||||| Sbjct 971192 AATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCAATAAGAAGACTATACATTTCAGAA 971251 Query 93398 TGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACT 93457 || | || ||||| ||||||||||| || |||||||| | ||||| || ||||| ||| Sbjct 971252 TGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACT 971311 Query 93458 TCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaa 93517 ||||| ||||| ||| || | |||||||| ||||| |||||| ||||||||| ||| Sbjct 971312 TCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGCTGCAAAGAAA 971371 Query 93518 GCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAAT-CGGATAG 93576 |||| | ||| |||||||| | |||| || || || ||||| | | || | Sbjct 971372 GCCAGAACATGGAATATAAAATATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCTGA-AT 971430 Query 93577 ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACAT 93636 || || || || || || || ||| | ||||| || || || || || || || ||||| Sbjct 971431 GTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCCTCCGCCTTCTTATACAT 971490 Query 93637 ATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAG 93696 | ||| || || || || | || || || |||||||| || ||||| ||| | || Sbjct 971491 CTGCCAGATATCGTGGTACTCGATGGGGAAGATGACAAAGCGGCGGGGGTTTTCTCTCAG 971550 Query 93697 TAACGGCTC 93705 | ||| || Sbjct 971551 CAGCGGTTC 971559 >seq9112 Length=1254116 Score = 221 bits (244), Expect = 1e-52 Identities = 437/646 (68%), Gaps = 3/646 (0%) Strand=Plus/Minus Query 93060 GTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGT 93119 ||||||| ||| | | | |||| |||| | ||| ||||| | |||||||| || | Sbjct 511289 GTGGTTTGTGTGCCAGGTGATTGAACATCAGGCAAGCAAAACCACAGTGTAAACCCTCAT 511230 Query 93120 CTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCC 93179 ||| || | |||||| || || | || || | |||||||||||||||||||| Sbjct 511229 CTCCACTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCC 511170 Query 93180 AAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAA 93239 | ||||| || |||||| ||||||||| | | |||||| | | ||||| | |||| Sbjct 511169 AGAATATCGATGCAAAATAACCAGAAAAGA---TGCCTTCCGCTGTAGCAAAGACTACAA 511113 Query 93240 TACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTT 93299 |||||| || | | || | || | ||||| | || |||||||| || || | Sbjct 511112 CACGTTCCCCATAGGTAGCTGCTTTGTCCCCAATCCAGTGCAAGGCCCAATCTGCCTTCT 511053 Query 93300 TCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTC 93359 |||| | |||||| | ||||| || || || || | | || | || | | |||| Sbjct 511052 TCTTGACACAAGGCATCGTTTCAATGGCATTGAAGCGAAATTCCCTTTCTTTGGGATCTT 510993 Query 93360 GTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTT 93419 |||||| || || || | | | ||||||| ||||||| | || ||||| ||||||| Sbjct 510992 TTATGTAAGTGTCAATAAGGAAACTATACATTCCAGAATGTATGTTTTCCATGGCAATTT 510933 Query 93420 GGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGA 93479 |||| || ||||||| | ||||| || | ||| |||||||| | ||| ||| || | Sbjct 510932 GGAAGCCACAGAAACAGCGGGCTTCTGTCACCTGAACTTCTTGGCTACATCGCTCCACCA 510873 Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT 93539 ||| |||| ||||| ||||| |||| |||| ||| ||| | ||| || ||||| Sbjct 510872 AGTTTGCATTTACTATGCCATCACTTGCTACAAAGAAAACCAGAACATGGGATAGAAAAT 510813 Query 93540 GTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTT 93599 | |||| || || || ||||| | | | || || || || || || || | Sbjct 510812 CTCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCT 510753 Query 93600 CGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAA 93659 | | ||||| || || ||||| || || || ||||| | ||| || || || || | Sbjct 510752 CCGCGGTCCAGAAGGAAGCTTCCGCCTTCTTATACATCTGCCAGATATCATGGTACTCGG 510693 Query 93660 TTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 | || || ||||||||| | ||||| | | | || | |||||| Sbjct 510692 TGGGGAAGATGACAAAATGGCAGGGGTTTTGTCTCAGCAGCGGCTC 510647 >seq11434 Length=1819511 Score = 123 bits (136), Expect = 3e-23 Identities = 307/461 (67%), Gaps = 5/461 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT-CATTGCTGAATGTTA 93149 ||| ||||||| |||||||| || || | || || || | ||||| ||||| | Sbjct 311821 GCAAGCAAAGTAACAGTGTAAACCCTCATCAC-TGCTAATAAGTTCATTGGAAAATGTGA 311879 Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209 || || | ||||||| ||||| ||||||| ||||| |||||| ||||||||| | Sbjct 311880 GGCCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGA 311939 Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGC 93269 | | | |||||| ||||| || ||| |||||| || | | || | | Sbjct 311940 AGGTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCC 311999 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 ||||| || ||||| | || || ||||| | ||| || | |||| | || || | Sbjct 312000 CAATCCAACACAAGACCCAAACTGCCTTCTTCTTGACACA-GGCATTGTTCCAATGGCAT 312058 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || || | || | || | |||| |||| ||| | || | ||| || | Sbjct 312059 TGAAGAGAAATTCCCTTTCTTTGTTATCTTTAATGTGTGT--CAATAAGGAGACTATTTA 312116 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | |||||||| | || || | ||||||||||| || ||||| || | ||| || | Sbjct 312117 TGTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAA 312176 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| | ||||||| |||| || || | ||||||| ||||| ||||| |||||| Sbjct 312177 TCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTG 312236 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCA 93550 |||| ||||||| |||| |||||||| | | || ||| Sbjct 312237 CAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTCA 312277 >seq9712 Length=6868699 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| ||||| | || || | ||||||||||||||||||||| ||||| || ||| Sbjct 3777345 TCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCA 3777404 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| ||||||||| || || |||||||| || ||||| || |||| |||||| Sbjct 3777405 AAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACAACACGTTC 3777457 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 |||| |||||| || || || | ||| ||||||||||||||| | || ||||| || Sbjct 3788502 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 3788561 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 ||||||||| || |||||||| | ||||| || ||||| |||||||| ||||| ||| Sbjct 3788562 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 3788621 Query 93475 TAC 93477 || Sbjct 3788622 CAC 3788624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556771556096040