Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq3359 138 9e-28
seq11879 127 2e-24
seq5702 122 7e-23
seq3144 116 3e-21
seq3192 105 6e-18
seq3525 100 2e-16
seq5580 91.5 1e-13
seq1113 82.4 6e-11
>seq3359
Length=286138
Score = 138 bits (152), Expect = 9e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || ||||| || || | | || ||||| ||| ||||| | | |
Sbjct 33221 AAACATGCAGATCTTTGTGAAGACCCTCCCGGGCAAAACCATCAACCTTGAGGGCAAGCC 33280
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
|| || ||| | || | ||||| ||||||||||||||||||||||| ||||| ||
Sbjct 33281 CAGTGACACCATTGAGAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGA 33340
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|| || ||||| |||||||||||||||||| | || ||| | |||| |||| || ||
Sbjct 33341 CCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCTGCACTCTCTCAGACTA 33400
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||| || ||||| |||||| | || | || ||||| |||| || ||
Sbjct 33401 CAACATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGG 33451
>seq11879
Length=1036973
Score = 127 bits (140), Expect = 2e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||||||||| || | |||
Sbjct 346175 AGATGCAGATCTTTGTGAAGACACTTACGGGCAAGACCATCACTCTTGAGGTCAAGCCCA 346116
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| || ||| ||||| ||||||||||||||||||||||| ||||| || |
Sbjct 346115 GTGACACCAATGAGGATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACC 346056
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| ||| |||||||||||||| | |||||| ||| || |||| || |||
Sbjct 346055 AGCAGCATCTGATACTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCAGACTACG 345996
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| |||| ||||||
Sbjct 345995 ACATCTGGGAAGAGTCCACC 345976
>seq5702
Length=3466958
Score = 122 bits (134), Expect = 7e-23
Identities = 150/204 (74%), Gaps = 1/204 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| | || |||
Sbjct 1722468 AGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGATTGAGCCCA 1722409
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGA-GGGTATTCCACCCGAT 22335
|| ||| | | || ||||| ||||||||||||||||| |||||| ||||| ||
Sbjct 1722408 GTGACACCATTTAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGGTATCCCACCTGAC 1722349
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || | ||| ||| |||| || |||||| | |||||| |||||| |||| | |||
Sbjct 1722348 CAGCAGCATCTGATACTTGCTGGGAAACAGCTGGAGGATGGCCGCACTCTCTCAGGCTAC 1722289
Query 22396 AACATTCAAAAAGAATCCACCATA 22419
||||| || ||||| |||||| ||
Sbjct 1722288 AACATCCAGAAAGAGTCCACCCTA 1722265
>seq3144
Length=887747
Score = 116 bits (128), Expect = 3e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| | ||||| | || | || || || || ||| ||||| || || |||
Sbjct 249518 ATGCAGCTCTTTGTGGAGACCCTCACGGGCAAGACCATCATCCTTGAGGTCGAGCCCAGT 249459
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
| ||| || || ||||| |||||||||||||| |||||||| ||||| || ||
Sbjct 249458 TACACCACTGAGAATTTCAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCTGACCAG 249399
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| |||||||| ||||| ||| | |||||| | |||| |||| || ||||||
Sbjct 249398 CAGCGTCTGATATTTGCTGGCAAGCAGCTGGAGGATGGCTGCACTCTCTCAGACTACAAC 249339
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGC 22432
|| |||||| | |||||| | || | ||| |||
Sbjct 249338 ATCCAAAAACAGTCCACCGTGCACCTGGTTCTGC 249305
>seq3192
Length=5961771
Score = 105 bits (116), Expect = 6e-18
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|||||||||||||||||||| || ||||| || || || | ||| ||| |||| ||||||
Sbjct 5502314 AAAATTCAAGACAAGGAGGGCATCCCACCTGACCAGCAGCATCTGATACTTGCGGGCAAA 5502373
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| | |||| |||| || |||||||| || ||||| |||||
Sbjct 5502374 CAGCTGGAGGATGGCTGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCAC 5502426
>seq3525
Length=3185992
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || | ||| || || | || || | ||| |||| |||| || | |||
Sbjct 2396839 ATGCAGATCTCTGTAAAGACCCTCACAGGAAGAACCATCACCTTTGAGGTCCAGCCCAGT 2396898
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| || || ||||| || || || ||||||||||| || ||||| || ||
Sbjct 2396899 GACACCAGTGAAAATGTCAAAGCCAAGATCCATGACAAGGAGGGCATCCCACCTGACCAG 2396958
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||| ||||||| ||||||||||| |||||| || ||| | || ||||| |||
Sbjct 2396959 CAGCATCTGATATTTGTGGGCAAACAGTTGGAGGATGGCCACACTCTTTCAGATTATAAC 2397018
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| ||||||
Sbjct 2397019 ATCCAGAAAGAGTCCACC 2397036
>seq5580
Length=2742563
Score = 91.5 bits (100), Expect = 1e-13
Identities = 90/115 (78%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTAT-ATTTGCCGGCAA 22361
||||||||||||||| |||| || | ||| || || || |||| || ||||| |||||
Sbjct 824388 AAAATTCAAGACAAGTAGGGCATCCTACCTGACCAGCAGTGTCTGATAATTTGAGGGCAA 824329
Query 22362 ACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
| || | |||||| |||||| |||| || |||||||| || ||||| ||||||
Sbjct 824328 ATAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCACC 824274
>seq1113
Length=4596694
Score = 82.4 bits (90), Expect = 6e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380
||||| ||||| || || || ||||| |||||||||||||||||| | || ||| ||||
Sbjct 2833088 GGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGC 2833147
Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408
|| |||| || |||||||| || ||||
Sbjct 2833148 ACTCTCTCAGACTACAACATCCAGAAAG 2833175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419662415007865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |