Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3503 114 1e-20 seq4303 105 6e-18 seq3214 98.7 8e-16 seq5491 95.1 1e-14 seq3414 89.7 4e-13 seq7746 84.2 2e-11 seq3002 84.2 2e-11 >seq3503 Length=2845972 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| ||||||||||| | ||| | ||||| || |||||||| ||||| || Sbjct 460293 ACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGA 460352 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || |||||| ||||| || ||||| |||| || | || || || ||||| Sbjct 460353 CAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 460412 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| |||| | ||| | || || | || ||| || Sbjct 460413 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 460472 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || || || || ||||| || ||||||||||| Sbjct 460473 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 460520 >seq4303 Length=4886142 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | ||||| || |||||| | ||||| || Sbjct 2814807 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCAGA 2814748 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || |||||| ||||| || ||||| |||| || | || || || ||||| Sbjct 2814747 CAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 2814688 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| |||| | ||| | || || | || ||| || Sbjct 2814687 AATTCCTTCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 2814628 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || || || || ||||| || ||||||||||| Sbjct 2814627 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2814580 >seq3214 Length=3208335 Score = 98.7 bits (108), Expect = 8e-16 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 114159 CCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA 114218 ||||| |||||||| || ||||| | ||||| ||||||||||| ||||| || || | Sbjct 1956904 CCACGGAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAA 1956845 Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 ||||| |||||| ||||| || ||||| |||| | | ||| | | |||||||| Sbjct 1956844 GTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATT 1956785 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 ||||| || | ||||| |||| | || | || || | || ||| || || Sbjct 1956784 CCTTCCTTAACCTGGATCTTGGCCTTTACATTTTATATCGTATCCGAGGGTTCAACCTCG 1956725 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||| | || || || || || ||| | || ||||||||||| Sbjct 1956724 AGGGTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCAT 1956681 >seq5491 Length=6255621 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| || || || || |||||| || || || || Sbjct 1751723 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCG 1751782 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| |||||||||||||| || || |||||| || Sbjct 1751783 GCAAAGATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTTGCCTTG 1751842 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| ||| ||||| || | ||| | || ||||| ||||| || Sbjct 1751843 ACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTC 1751902 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 1751903 TTCACGAAGATCTGCAT 1751919 >seq3414 Length=2822291 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | ||| || |||||| || || || || Sbjct 171381 GTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 171440 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| || || ||||||||||| || ||||| || Sbjct 171441 GCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTGGCCTTC 171500 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | |||||| ||| || || || | ||| | || ||||||||||| || Sbjct 171501 ACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTC 171560 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 171561 TTCACAAAGATCTGCAT 171577 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | ||| || |||||| || || || || Sbjct 171609 GTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 171668 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| || || ||||||||||| || ||||| || Sbjct 171669 GCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 171728 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 171729 ACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 171788 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 171789 TTCACGAAGATCTGCAT 171805 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| || | ||| || |||||| || || || || Sbjct 171837 GTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 171896 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| || ||||||||||| || || || || || Sbjct 171897 GCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTC 171956 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | |||||| ||| || || || | ||| | || ||||||||||| || Sbjct 171957 ACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTC 172016 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 172017 TTCACGAAGATCTGCAT 172033 >seq7746 Length=1950873 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/228 (68%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | ||||| || |||||||| ||||| || Sbjct 468093 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGA 468152 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| | | |||||| ||||| || ||||| |||| | || || | ||||| Sbjct 468153 CAAAGTCCATGCATCTTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAGG 468212 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || |||| |||| | ||| | || || | || ||| || Sbjct 468213 AATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 468272 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || || ||| | || ||||| | ||||||||||| Sbjct 468273 ATCGAGGGTGATGGTCTTCCCG-TAAGGGTTTTCATGAAAATCTGCAT 468319 >seq3002 Length=4620727 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 114159 CCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA 114218 |||| |||||||| | | ||| | |||| || |||||||||||| | || || | Sbjct 2620208 CCACAAAGTCTCAACAAAAGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAA 2620267 Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 ||||| ||||| ||||| | ||||| |||| || | || || || |||||||| Sbjct 2620268 GTACGTCCGTCTTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATT 2620327 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 ||||| || || ||||| |||| | ||| | || || | || ||| || || Sbjct 2620328 CCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCA 2620387 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||| | || || || | || ||||| || ||||||||||| Sbjct 2620388 AGGGTGATAGTCTTCCCCCTTAGGGTTTTCACGAAAATCTGCAT 2620431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420068751505452