Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq4303 104 2e-17
seq3503 104 2e-17
seq3414 95.1 1e-14
seq3214 93.3 4e-14
seq11934 87.8 2e-12
seq7746 87.8 2e-12
seq3359 86.0 6e-12
>seq4303
Length=4886142
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || |||||| | ||| | |||||||| |||||| ||||||| ||
Sbjct 2814809 GCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCA 2814750
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || || ||| || || || || ||||| |||||| || |||||||| |||
Sbjct 2814749 GACAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 2814690
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||| | || |||| ||
Sbjct 2814689 GGAATTCCTTCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCA 2814630
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| ||| | || || || || || ||||| || |||||||||||
Sbjct 2814629 ACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2814580
>seq3503
Length=2845972
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || ||| || | ||| | |||||||| |||||||||||||| ||
Sbjct 460291 GCACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCA 460350
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || || ||| || || || || ||||| |||||| || |||||||| |||
Sbjct 460351 GACAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 460410
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| || ||| | | ||| | || |||| ||
Sbjct 460411 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCA 460470
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| ||| | || || || || || ||||| || |||||||||||
Sbjct 460471 ACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 460520
>seq3414
Length=2822291
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || |||||||| || || ||||| || | ||||| |
Sbjct 171819 CGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 171878
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| ||||| || ||||| |||||
Sbjct 171879 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTA 171938
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| |||||| ||| | | ||||| |||||| | ||| || || | ||| |
Sbjct 171939 TCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 171998
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||||||||| || || || || ||||||||
Sbjct 171999 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 172033
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || | ||||| |
Sbjct 171591 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 171650
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| ||||| || ||||| || ||
Sbjct 171651 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTA 171710
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||| | | ||||| |||||| | ||| ||||| | ||| |
Sbjct 171711 TCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 171770
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||||||||| || || || || ||||||||
Sbjct 171771 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 171805
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| |||| || | || ||||| || || || ||||| || | ||||| |
Sbjct 171363 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCA 171422
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || || |||| | | |||||| ||||| || ||||| || ||
Sbjct 171423 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTA 171482
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
|| ||| || ||| | | ||||| |||||| | ||| || || | ||| |
Sbjct 171483 TCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 171542
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||||||||| || || ||||| ||||||||
Sbjct 171543 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 171577
>seq3214
Length=3208335
Score = 93.3 bits (102), Expect = 4e-14
Identities = 156/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 126888 CACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCA 126947
|||| || | || |||||| ||||| | ||||||||||||||||||||||| || ||
Sbjct 1956906 CACCACGGAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACA 1956847
Query 126948 TCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTA 127007
|| || ||| || || || || ||||| ||||| || |||| || | ||||| |
Sbjct 1956846 AAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAA 1956787
Query 127008 TGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTT 127067
| || ||||| || ||| || ||| | | || | || |||| || || |
Sbjct 1956786 TTCCTTCCTTAACCTGGATCTTGGCCTTTACATTTTATATCGTATCCGAGGGTTCAACCT 1956727
Query 127068 CGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| ||| | || || || || || ||| | || |||||||||||
Sbjct 1956726 CGAGGGTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCAT 1956681
>seq11934
Length=6643911
Score = 87.8 bits (96), Expect = 2e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || |||||| | ||| | |||||||| |||||||||||||| ||
Sbjct 5736065 GCACCACCACGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCA 5736006
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || || ||| || || || || ||||| |||||| || |||||||| |||
Sbjct 5736005 GACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 5735946
Query 127004 GGTATGCCCTCCTTGTCC 127021
|| || || ||||| |||
Sbjct 5735945 GGAATTCCTTCCTTATCC 5735928
>seq7746
Length=1950873
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/230 (69%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || |||||| | ||| | |||||||| |||||||||||||| ||
Sbjct 468091 GCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCA 468150
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
|| || | | ||| || || || || ||||| ||||| || |||||| | |||
Sbjct 468151 GACAAAGTCCATGCATCTTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGA 468210
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || || ||||| ||| ||| | ||| | | ||| | || |||| ||
Sbjct 468211 GGAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCA 468270
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||| ||| | || || || || || ||||| | |||||||||||
Sbjct 468271 ACATCGAGGGTGATGGTCTT-CCCGTAAGGGTTTTCATGAAAATCTGCAT 468319
>seq3359
Length=286138
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||||||||| || | || |||||||| || || ||||| ||
Sbjct 33451 CCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 33392
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||| ||| || |||||||| || || | |||| |||||||| || || ||
Sbjct 33391 AGAGTGCAGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 33332
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||| | ||| ||| || |||| | || | |||||| | || | |
Sbjct 33331 ATACCCTCCTTGT-CTTGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTTGCC 33273
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | | | | |||||||| | || || || ||||| |||||||||
Sbjct 33272 CTCAAGGTTGATGGTTTTGCCCGGGAGGGTCTTCACAAAGATCTGCATG 33224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475424595053040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |