Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq8201 192 8e-44 seq5647 127 3e-24 >seq8201 Length=2345327 Score = 192 bits (212), Expect = 8e-44 Identities = 177/224 (79%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 || || ||||||||||| |||||||||||||| || || ||||| || |||||||| || Sbjct 857436 GTCTGGAACAACTGCTCATCACCCCATTCCGGATGCTCCTGTTTAAGCACATCGCACACT 857495 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 ||||||||||||| |||||| || ||||| |||||||| | ||| ||||| | |||||| Sbjct 857496 CTGTTGTGTTCTCGCAGCCAGATTGTGGCATACATCATCAGACCAGGCACCAGACCAAAG 857555 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 || || | |||||| ||||| ||||||| || || |||| || | || | ||| | Sbjct 857556 ACCTCCTGCCCCACAGCAAACCGCAGATGCTCAGGGACTTGAGGAGGGTAGATCATCTCT 857615 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 |||| || |||||||| ||||| |||||||| || || ||||| Sbjct 857616 GCCTGAGTATCTTTGACTGTGGGAGGATACATCTCTCCATCAAT 857659 Score = 181 bits (200), Expect = 2e-40 Identities = 211/285 (74%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 8891 AACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATG 8950 || ||||| |||||||| || || ||||| |||||||| | || || || | ||| Sbjct 855423 AAGGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGAATTGAGGCAGTGTTGATGATT 855482 Query 8951 TCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACG 9010 | ||||| || || || || || ||||| || |||||||| || || || || || || Sbjct 855483 TGAAAACCCACTTCTCCACCAAAAGTGCTTGGCTTCCAGTAGGCAGGAGAACATATAACA 855542 Query 9011 TTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAG 9070 || |||| || ||||||||||| ||||| || || | || | ||| ||||||| ||| Sbjct 855543 TTACCCATAAGTCCTTTCAAGGAGAACGGTGCTCCAACTTCTACCATGGTCTCACCAAAG 855602 Query 9071 ATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACG 9130 |||||| | ||||| || ||||| || | | | ||| || || || ||||| |||| | Sbjct 855603 ATGGCATCTGGACGAGGCTTTTCTACCAGAAGGGCAGGATACAGCTCCACAGCATCGATG 855662 Query 9131 TCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || |||||||| ||||||||||| |||| || ||||| || ||| Sbjct 855663 TCACCATAGAGTGCTTCCAACTCTGCAGACATTTCCTTTTCTCCT 855707 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| |||| |||| | |||||||| || |||||| ||| ||| | || Sbjct 858590 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 858649 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 ||| || || || ||||| || | || || || ||||||| ||| |||||||||||||| Sbjct 858650 AAACTGATGCGTGAAGTGCTGGGCAAAGAATGCAAACATCATGTTTGTGCCCTGGGGATC 858709 Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAGACG 10300 ||||| || | || | | || || ||| |||||||||| ||||||| || || | Sbjct 858710 AGGGATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCATTTGAATCAGGAAGCTG 858769 Query 10301 CGCCTTACCTGA 10312 | ||||||||| Sbjct 858770 CTTCTTACCTGA 858781 Score = 113 bits (124), Expect = 7e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | ||||| ||||||||| ||| || ||||| || | ||| ||| Sbjct 859201 TCACCTTTCACACCCAAGGGAGTCGGGCAGTCATCAGGCACAGGAGGAAGGGCTCTGGTA 859260 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || || || ||||||||||| ||||||||||| || ||||| Sbjct 859261 TAATAGGAGAGGTTAGAGAAGGCTTCCCAGCTTTTGTAGCCATAGTCAGCATTGTAAGTT 859320 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || || |||||||||| | || |||||| Sbjct 859321 GGTGGGCTGTCAATCAAATGTGATCTGGCT 859350 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 10840 CTTACGGGTCGAACAGTGCCGATCATAAAACCCCGTCCGCGTACAATCGCACCAATAACG 10899 |||||| || || |||| | |||| || || ||||| |||||||||||| ||| | Sbjct 860249 CTTACGTGTTGAGCAGTTTTCACCATAGAATCCTGTCCGGGTACAATCGCACTTATATTG 860308 Query 10900 ATCAAACCCCACCGTCATGCATACCCCTCGATTCTGGCACGGGTGCGAACAGCAAGGGTT 10959 ||||| ||||| |||| ||||| ||||| || || || |||| ||||||||||| || Sbjct 860309 GTCAAATCCCACACTCATACATACACCTCGGTTTTGACATGGGTAGGAACAGCAAGGATT 860368 Query 10960 GGCTGCAATTTAA 10972 ||| ||||| || Sbjct 860369 TGCTACAATTAAA 860381 >seq5647 Length=3297893 Score = 127 bits (140), Expect = 3e-24 Identities = 179/249 (72%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 || || || || ||||||| || || | || ||||| || ||||| || ||||||||| Sbjct 221833 GTGGCCGTCTTGACGATGTTAAAGCCCATCTCGCCGCCAAAAGTGCTCGGCTTCCAGTAC 221892 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 |||| || |||||| ||| | | ||| || || | |||||| |||||||| | ||| Sbjct 221893 TCCGGAGAACAGATGGGATTCCCTAGGAGACCCTTGAGGGAAAAGGGAGCCCCAATCTCT 221952 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCC-AGTGTA 9111 || || ||||| || ||||| | ||| | ||||| | || | |||| || ||| Sbjct 221953 ATCATACTCTCCCCAAAGATAGAGTTTGGATGGCACTTTTCAA-GAAGCAGCCCAGGGTA 222011 Query 9112 GAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTC 9171 || || | || || | ||| ||||| || | |||||||| || || ||||||||||| Sbjct 222012 GAACTCCAACGCGTCAATGTCTCCATACAGCTCCTCCAACTCCGCTGCCATCTCCTTCTC 222071 Query 9172 ACCTACAAG 9180 |||||||| Sbjct 222072 TCCTACAAG 222080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723612013541400