Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3359 129 4e-25 seq5702 120 2e-22 seq9023 109 4e-19 seq5491 109 4e-19 seq11879 105 4e-18 seq3525 105 4e-18 seq9489 104 2e-17 seq3414 93.3 3e-14 seq1113 87.8 1e-12 >seq3359 Length=286138 Score = 129 bits (142), Expect = 4e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| |||||||| ||||| ||||| || || | | |||| Sbjct 33437 CAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCAGCCATC 33378 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 ||||||||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 33377 TTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTC 33318 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || ||||||| | || | |||| || || | || | | | ||||| Sbjct 33317 TTGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTTGCCCTCAAGGTTGATGGT 33258 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| |||| ||| |||||||||||||||||||| || Sbjct 33257 TTTGCCCGGGAGGGTCTTCACAAAGATCTGCATGTT 33222 >seq5702 Length=3466958 Score = 120 bits (132), Expect = 2e-22 Identities = 145/194 (75%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||| | || || | || |||| ||||||||||| || |||| | Sbjct 1722275 TCTTTCTGGATGTTGTAGCCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTCCCAGCAAGT 1722334 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCAC-CCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | |||||||| | || | |||||||||||| ||| || |||||| | Sbjct 1722335 ATCAGATGCTGCTGGTCAGGTGGGATACCCCTCCTTGTCTTGAATTTTGGCTTTGAC--A 1722392 Query 34910 TGCTA--TCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | ||| | | |||| || ||||| || | ||| ||||| || |||||||| |||||| Sbjct 1722393 TTCTAAATGGTGTCACTGGGCTCAATCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTC 1722452 Query 34968 ACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 1722453 ACAAAGATCTGCAT 1722466 >seq9023 Length=1944319 Score = 109 bits (120), Expect = 4e-19 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| |||| || || || |||| ||||||||||| || |||||| Sbjct 753095 TCTTTCTGGATGTTGCAGTCTGAGAGAGCGCGGCCATCCTCCAGCTGTTTGCCCGCAAAT 753154 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||| | ||| || ||||| || Sbjct 753155 ATCAGACGCTGCTGGTCAAGTGGGATGCCCTCCTTGGCTTGAATTTTGGCCTTGAC--AT 753212 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || | | |||| || ||| || |||| ||| ||||| || || | ||| ||||||| Sbjct 753213 TCTCAGTGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCTGCGAGGGTCTTCA 753272 Query 34969 CAAAGATCTGCAT 34981 ||||||||||||| Sbjct 753273 CAAAGATCTGCAT 753285 >seq5491 Length=6255621 Score = 109 bits (120), Expect = 4e-19 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||||| || ||| | || |||| |||||||| ||||||||||| Sbjct 1751729 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAG 1751788 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | || ||||| || ||||| ||||| || Sbjct 1751789 ATCAGCCTCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTTGCCTTGAC--AT 1751846 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | || | || ||| || |||| ||| ||||| || || || || ||||||| Sbjct 1751847 TCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCA 1751906 Query 34969 CAAAGATCTGCAT 34981 | ||||||||||| Sbjct 1751907 CGAAGATCTGCAT 1751919 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||| | || |||||||| | ||| |||||||| ||||| ||||| || Sbjct 1756761 CCCCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 1756820 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | ||| |||| ||||||||||| || ||||| || | | |||||||| | || Sbjct 1756821 AGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 1756880 Query 34875 ACCCCCTCCTTGTC 34888 | || |||||||| Sbjct 1756881 ATGCCTTCCTTGTC 1756894 >seq11879 Length=1036973 Score = 105 bits (116), Expect = 4e-18 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 34800 ATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGT 34859 |||| ||||| || || |||| |||| ||||||||||| ||||||| ||| || | Sbjct 345992 ATGTCGTAGTCTGAGAGAGTTCGGCCATCCTCCAGCTGTTTGCCGGCAAGTATCAGATGC 346051 Query 34860 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT-ATCGA 34918 |||||||| | || | ||||||||||| ||| || |||||| || || || | Sbjct 346052 TGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGAC--ATCCTCATTGG 346109 Query 34919 T-TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCT 34977 | |||| || || || || | || ||||| || ||||| || |||||||||||||||| Sbjct 346110 TGTCACTGGGCTTGACCTCAAGAGTGATGGTCTTGCCCGTAAGTGTCTTCACAAAGATCT 346169 Query 34978 GCAT 34981 |||| Sbjct 346170 GCAT 346173 >seq3525 Length=3185992 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| |||||||| || ||||| | | |||| |||| |||||| || ||||| Sbjct 2397029 TCTTTCTGGATGTTATAATCTGAAAGAGTGTGGCCATCCTCCAACTGTTTGCCCACAAAT 2396970 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||||||||| ||||| |||||| | Sbjct 2396969 ATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCATGGATCTTGGCTTTGACATTT 2396910 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | | | |||| || || || || | ||| |||||| |||| ||||| ||||| ||| Sbjct 2396909 TCACTGGTGTCACTGGGCTGGACCTCAAAGGTGATGGTTCTTCCTGTGAGGGTCTTTACA 2396850 Query 34971 AAGATCTGCAT 34981 |||||||||| Sbjct 2396849 GAGATCTGCAT 2396839 >seq9489 Length=9372684 Score = 104 bits (114), Expect = 2e-17 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| ||||| || || || || |||| ||| Sbjct 432534 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTCTAGTCTGAGAGACTGCGGCCATCCTCC 432593 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||||| || |||||||| || | |||||||| || | | |||| |||||| Sbjct 432594 GGCTGTTTGCCCGCAAATATCAGACACTGCTGGTCAGGCAGGATGCCCTACTTGTCTTGG 432653 Query 34893 ATCTTCTG-TTTGACGGATGCTA--TCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || ||| | |||||| || || | | || | || ||| || || | ||| ||||| Sbjct 432654 AT-TTCGGCTTTGAC--ATTCTCAGTGGTGTCCCTGGGCTCCACCTCAAGGGTGATGGTC 432710 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||| |||| || ||||||||||||||||| Sbjct 432711 TTGCCCATGAGGGTGTTCACAAAGATCTGCAT 432742 >seq3414 Length=2822291 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||||| ||||| | || |||| |||||||| || || ||||| Sbjct 171843 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 171902 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | || ||||| || || || || || | Sbjct 171903 ATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTT 171962 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||| || || | ||| ||||| || || || || |||||||| Sbjct 171963 TCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 172022 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 172023 AAGATCTGCATTTT 172036 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | || |||| ||| | || || ||||| ||||| ||||| || Sbjct 171351 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 171410 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||||||| || || ||||| || || | |||||||| | || Sbjct 171411 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 171470 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || ||||| || || | | || | |||| || ||| || Sbjct 171471 ATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 171530 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | ||| ||||| || || || || ||||||||||||||||||||| Sbjct 171531 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATA 171578 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||||| | || |||| |||||||| || || ||||| Sbjct 171615 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 171674 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | || || || || ||||| || || | Sbjct 171675 ATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTT 171734 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||| || || | ||| ||||| || || || || |||||||| Sbjct 171735 TCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 171794 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 171795 AAGATCTGCATA 171806 >seq1113 Length=4596694 Score = 87.8 bits (96), Expect = 1e-12 Identities = 86/109 (79%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 34878 CCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACAT 34935 ||||||||||| ||| || |||||| || || || | |||| || |||||| | Sbjct 2832825 CCCTCCTTGTCTTGAATTTTGGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCAACCT 2832768 Query 34936 CGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| ||| |||||||| |||||||| |||||||||||||||||||| || Sbjct 2832767 CGAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 2832719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324582874072488