Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq8034 259 6e-64 seq9112 219 5e-52 seq11434 170 2e-37 seq9712 111 2e-19 seq4492 111 2e-19 >seq8034 Length=1360500 Score = 259 bits (286), Expect = 6e-64 Identities = 342/472 (72%), Gaps = 2/472 (0%) Strand=Plus/Plus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| | || ||||||||||| |||||||| |||||||| || || | |||| | Sbjct 970933 TTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGTTCACT 970992 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| || | || ||||| | |||| ||| || | ||| ||||| | ||||||||| Sbjct 970993 GGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGA 971052 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342 || |||||||| || ||||| ||||| ||||| ||||| | |||| ||| | || | Sbjct 971053 ACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTACGACACGTTCACCATAGGTAGC 971112 Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402 | || |||||| | |||||||||||| || ||||| || || Sbjct 971113 CTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGT 971172 Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462 |||||| || || |||||||| | |||||| |||| ||| ||||| ||||| || Sbjct 971173 TTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCAATAAG 971232 Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522 | ||||||||||||||| || || ||||| || || || || || ||||| ||||| | Sbjct 971233 AAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCG 971292 Query 37523 AGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 ||||| | |||| ||||| || | ||| | || | ||||||||||| ||||| | Sbjct 971293 GGCTTCTG-TAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGC 971351 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC 37633 |||| || |||||||||||||| ||||||| |||||||| ||| || || Sbjct 971352 CATCGCTTGCTGCAAAGAAAGCCAGAACATGGAATATAAAATATCTCTCCTC 971403 >seq9112 Length=1254116 Score = 219 bits (242), Expect = 5e-52 Identities = 327/460 (71%), Gaps = 7/460 (2%) Strand=Plus/Minus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || |||||| |||| |||||||| ||||||| ||| || | |||||| |||||||| | Sbjct 511257 CAAGCAAAACCACAGTGTAAACCCTCATCTCCACTAATAAGTTCATTGGAAAAGGTGAGG 511198 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | |||| ||| || | ||| ||||| | ||||||| | |||||||||| Sbjct 511197 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA-- 511140 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA--TAATCAG 37353 | ||||| ||| ||||| |||||| |||| | || | || | | || | || Sbjct 511139 -TGCCTTCCGCTGTAGCAAAGACTACAACACGT-TCCCCATAGGT-AGCTGCTTTGTCCC 511083 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 |||||| | | |||||||||||| || ||||| || |||||||| || | Sbjct 511082 CAATCCAGTGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCAT 511023 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 | ||| |||| | |||||| |||| |||| ||||| ||||| || |||||||||| Sbjct 511022 TGAAGCGAAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCAATAAGGAAACTATACA 510963 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 || |||| || || ||||| || || || || || ||| | ||||| | ||||| | | Sbjct 510962 TTCCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCACAGAAACAGCGGGCTTCTGTCA 510903 Query 37534 ATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTG 37593 ||||| || | | | | || | |||||| |||| ||||| |||||||| ||| Sbjct 510902 CCTGAACTTCTTGGCTACATCGCTCCACCAAGTTTGCATTTACTATGCCATCACTTGCTA 510843 Query 37594 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC 37633 |||||||| | ||||||| || ||||| ||| || || Sbjct 510842 CAAAGAAAACCAGAACATGGGATAGAAAATCTCTCTCCTC 510803 >seq11434 Length=1819511 Score = 170 bits (188), Expect = 2e-37 Identities = 319/461 (69%), Gaps = 7/461 (2%) Strand=Plus/Plus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || ||||| | ||| |||||||| ||||| || || || | |||||| ||||| || | Sbjct 311822 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 311881 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | ||| ||| | | ||| ||||| ||||||||| ||||||||||| Sbjct 311882 CCAGGCATCAGTCCTTGTTTCCTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 311941 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA-CTATAATCAGA 37354 | | ||| ||| ||||| ||| ||| |||| || || | || | || | Sbjct 311942 GTGCTTTCCACTAGGGCAAAGGCTGCAACACGTTCTCCATGGGTAACATCTTTGTTCCCA 312001 Query 37355 AATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTT 37414 | |||| |||| ||||||| || ||||| || ||||| |||| || || Sbjct 312002 A-TCCAACACAAGACCCAAACTGCCTTCTTCTTGACACAGGCA-TTGTTCCAATGGCATT 312059 Query 37415 TAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACAT 37474 |||||||| | |||||| ||||| | || | || ||||| || | ||||| || Sbjct 312060 GAAGAGAAATTCCCTTTCTTTGTTATCTTTAATGT--GTGTCAATAAGGAGACTATTTAT 312117 Query 37475 TTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAA 37534 ||||| || || ||||| |||| || || || ||||| || || | ||| | ||| Sbjct 312118 GTCAGAATGTATGTTTTCTGTAGCAATTTGGAAGCCATAGAAGCAGAAGGTTTCTG-TAA 312176 Query 37535 T-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTG 37593 | |||| || | || ||| | | |||||||||| ||||||||||||| |||| Sbjct 312177 TCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTG 312236 Query 37594 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 37634 |||||||||| |||| ||| |||||||| |||||| ||| Sbjct 312237 CAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTCA 312277 >seq9712 Length=6868699 Score = 111 bits (122), Expect = 2e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | |||||| ||||| || | || ||||| | |||| ||| || Sbjct 3777327 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 3777386 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| ||||| | ||||||||| ||||||||||| || ||||| ||||| ||||| ||| Sbjct 3777387 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 3777446 Query 37320 ACAAGACGT 37328 |||| |||| Sbjct 3777447 ACAACACGT 3777455 Score = 82.4 bits (90), Expect = 9e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||||||| | ||||| || || |||| |||| || || || || |||||||||| Sbjct 3775215 CATCACTCCCATCCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTT 3775273 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||| ||||| |||||||| |||||||| || Sbjct 3775274 CCAGTGAAATATTCTCCATAAAGTCAAATGGGTT 3775307 >seq4492 Length=3487830 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| ||||| || | ||||||||| | |||||| || | Sbjct 1722499 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 1722558 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| | Sbjct 1722559 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1722618 Query 37318 CTAC 37321 | || Sbjct 1722619 CCAC 1722622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592221873828840