Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq7379 125 6e-24 seq8879 118 9e-22 seq4880 113 4e-20 seq3669 105 5e-18 seq4614 91.5 1e-13 seq7169 82.4 6e-11 >seq7379 Length=6738282 Score = 125 bits (138), Expect = 6e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||||||||| || | ||||||||| ||||| || || Sbjct 5239852 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCAATGTTGAAAGGC 5239911 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || |||||||| ||||| |||||||| ||||| || || ||||| | || | Sbjct 5239912 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 5239971 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 || || ||||| || | || ||||| ||||| || ||||| || Sbjct 5239972 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAG 5240015 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||| || |||| ||||| || ||||||||||||||||| || || || || |||| ||| Sbjct 5244501 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTC 5244560 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 || ||||| ||| ||| ||| ||||||||||||||| ||| || ||||| || Sbjct 5244561 CCCTTCTTCTCTGGCGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATC 5244620 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGAccc 30317 |||||| || || ||||| || |||||||| | ||||| || || Sbjct 5244621 CCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTAGATCC 5244668 >seq8879 Length=1913551 Score = 118 bits (130), Expect = 9e-22 Identities = 190/267 (71%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 770579 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 770520 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 770519 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 770460 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 770459 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 770401 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 112317 || || |||| ||||| || || || || |||||||||||| ||||| || Sbjct 770400 TGAG------CGGTGGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGG-GAC 770348 Query 112318 ACGGCCACGATACCGTTCAG--AATGA 112342 || || ||||| | ||| || ||||| Sbjct 770347 ACAGCGACGATGCAGTTTAGCAAATGA 770321 >seq4880 Length=3737892 Score = 113 bits (124), Expect = 4e-20 Identities = 185/260 (71%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 3631568 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 3631509 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 3631508 TAAAGGTCAATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 3631449 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 3631448 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 3631390 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 112317 | ||| | |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 3631389 TGA-----GCA-GTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 3631337 Query 112318 ACGGCCACGATACCGTTCAG 112337 || || | ||| | ||| || Sbjct 3631336 ACAGCGATGATGCAGTTTAG 3631317 >seq3669 Length=4562161 Score = 105 bits (116), Expect = 5e-18 Identities = 181/259 (70%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || |||| |||||||| |||| || || || || | Sbjct 3050851 ATGAGCTCCTTGTGGAGGTTCCTTGCGCTCTCTGCTGAGAACTAAATTAATTCTATCCTT 3050910 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||||| || ||| || || ||||||||||| ||||| |||||||| ||||||| || Sbjct 3050911 TAAAGGTCGATCCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATT 3050970 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258 ||| || ||| |||||||| | | |||| | ||| | || | | || || || | Sbjct 3050971 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATTCC 3051029 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACA 112318 || || || |||| ||||| || || || || | ||||||||||| | | ||| Sbjct 3051030 TGAG---CGTAG---GCCAGGGCAGGTCCCCATTCTTGCTGATGCCCATGTTTTGGGACA 3051083 Query 112319 CGGCCACGATACCGTTCAG 112337 | || || || | ||| || Sbjct 3051084 CAGCGACAATGCAGTTTAG 3051102 >seq4614 Length=4929353 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 112082 GAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCA 112141 ||||||| || || || || || || |||||||| ||| || || || | | | Sbjct 190925 GAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGATCTAAATTAATTCTACCCTTTA 190866 Query 112142 GAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCT 112201 |||| |||||| || || ||||||||||||||||| ||||||| ||||||| |||| Sbjct 190865 AAGGTTGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCT 190806 Query 112202 GCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231 | || ||| |||||||| || | ||||| Sbjct 190805 GTTTACCTTCTACTGAAGAGGTTGTGGTCA 190776 >seq7169 Length=1898797 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || || || |||||||| |||| || || || | | | ||||| |||||| || || Sbjct 380095 TTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGGA 380154 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||||||||||||||| ||||||| ||||||| ||||| || ||| Sbjct 380155 ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 380202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408553751073833