Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq6158 96.9 1e-15 >seq6158 Length=9241946 Score = 96.9 bits (106), Expect = 1e-15 Identities = 180/263 (68%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| |||||||| ||| ||||||| ||| || || || || || | |||||||| Sbjct 4167292 TGGGTGTTATGGAAGAGTAGCTCCACAGTCAGGCTTGGCTGCAAAACACTTTATTGATGT 4167233 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| || || ||| | ||| || || ||||||||||| | |||||||| Sbjct 4167232 AGGAGCTGGTGTCATAAATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTT 4167173 Query 1085 TAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGA 1141 | || || ||| ||| | | || |||||| | ||||| ||| | ||||| || Sbjct 4167172 TGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATCGAATTGCACAGCTCATTTGCGA 4167116 Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGATTCCTTAGAGGATTCGGAAAGGGGTTC 1201 | | | ||| |||| || || | || | | || || || | ||||||||||| Sbjct 4167115 ACGGATTTTTTATCCAGAAATAGAAGTTGTTCAAGCTTTGGATGACACCGAAAGGGGTTC 4167056 Query 1202 TGCAGGATTTGGGTCTACCGGAA 1224 | || ||||| || ||||||| Sbjct 4167055 AGGTGGTTTTGGTTCCACCGGAA 4167033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138660485813076