Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6858 199 7e-46 seq8034 152 1e-31 seq6514 98.7 2e-15 seq3269 89.7 1e-12 >seq6858 Length=1016717 Score = 199 bits (220), Expect = 7e-46 Identities = 190/243 (78%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444 ||| |||||||||| | || | ||| || ||||| ||||||||| ||||||||||| Sbjct 796155 AGCAGCTGACAGCCGTTGCTGACGTGGGTCATGACCTTCTGTTTGAGCTGGGCCACCTGC 796214 Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504 ||||| |||| | |||||| | ||||| || ||||| || | ||||||| |||||| Sbjct 796215 TCCCGGAGAAGGCCGGCGGTACTCGACAGCCCCGCGTTCTCGGCCTTGAGCGTCTTCACC 796274 Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564 || |||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| Sbjct 796275 TTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCAGC 796334 Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624 |||||||| || | ||| || ||| | |||||||| || ||||| ||||||| ||| || Sbjct 796335 CGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCTTGGTCTTCCATGTTGATGGGG 796394 Query 241625 GAC 241627 ||| Sbjct 796395 GAC 796397 Score = 93.3 bits (102), Expect = 8e-14 Identities = 89/115 (77%), Gaps = 8/115 (7%) Strand=Plus/Plus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| ||||||||| | ||||| |||| | |||||| | ||||| ||||||| Sbjct 796192 TCTGTTTGAGCTGGGCCACCTGCTCCCGGAGAAGGCCGGCGGTACTCGACAGCCCCGCGT 796251 Query 238986 TATCAGACTTGAGCAT--------TCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | || | ||||||| | | |||||||| ||||||||||| |||||||| Sbjct 796252 TCTCGGCCTTGAGCGTCTTCACCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTT 796306 >seq8034 Length=1360500 Score = 152 bits (168), Expect = 1e-31 Identities = 394/595 (66%), Gaps = 23/595 (4%) Strand=Plus/Plus Query 48091 CTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 |||||| ||||||| |||||| ||| | | || ||| ||||| || | ||| || Sbjct 970909 CTCTGATGGTTTGTGTACCAGGTGTTTGA---ACATCAGGCAAGCAAAATCACAGTGTAA 970965 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 || || || | |||||| || | |||| || ||| |||||||| | || | | Sbjct 970966 ACCCTCATCTCTGCTGATAAGTTCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTT 971025 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 ||||||||||| || | || ||||| || || ||||||||||| |||||||| || || Sbjct 971026 CTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAA 971085 Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG-GAAAGCGCCCAGT 48329 || || | || || | | ||| | ||||| |||||| | ||| ||||| | Sbjct 971086 GGCTACGACACGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCAAG-GCCCAAT 971144 Query 48330 CTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCAC 48389 ||||||||||||||| || |||||||| || ||||| |||||| | || | Sbjct 971145 CTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAG------AAATTCCC 971198 Query 48390 CTGCGTCCGCAAC--ATAGGT-AGTG------AGCAGCTTTGCGTACATCTCAGAGTGCA 48440 | | | | | | ||||| |||| || || | ||||| ||||| || | Sbjct 971199 TTTCTTTGGGATCTTTTAGGTAAGTGTCAATAAGAAGACT---ATACATTTCAGAATGTA 971255 Query 48441 CATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTG 48500 || || || || || ||||| || ||||| | ||| || | ||| |||||| Sbjct 971256 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTT 971315 Query 48501 TGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAA 48560 | |||| ||||| || || ||||| ||||| ||||| || |||||||| || | Sbjct 971316 GGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGCTGCAAAGAAAGCCA 971375 Query 48561 GGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTT 48620 | ||||| | |||| | ||| | | | | || | | |||| ||| | ||| | Sbjct 971376 GAACATGGAATATAAAATATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCTGAATGTCCT 971435 Query 48621 TGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 || ||||||||| || || | ||||||||||| || || || || ||||| Sbjct 971436 TGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCCTCCGCCTTCTTATACAT 971490 >seq6514 Length=2016651 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| || || |||||||||||||||||| |||||| ||||||||||| ||| Sbjct 1867072 GTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGG 1867013 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCT 213641 || |||| || |||||| ||||||||||| || |||| || || ||| Sbjct 1867012 TTGCTCTTTCGATTACAAGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCT 1866959 >seq3269 Length=11517472 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| Sbjct 8577779 TTCACTTTTTCCTCCAGCCGGGCGATTCTCTCCAGCTTCCTTTTTCGGCACTTGGAGGCA 8577838 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| ||||||||| Sbjct 8577839 GCAATGCGGTTCCTCATACGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCA 8577898 Query 241619 ATCGGAGAC 241627 || || ||| Sbjct 8577899 ATGGGGGAC 8577907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931383510224640