Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq4603 302 5e-77
seq11713 185 1e-41
seq8223 114 1e-20
seq4458 96.9 4e-15
>seq4603
Length=3798766
Score = 302 bits (334), Expect = 5e-77
Identities = 662/986 (67%), Gaps = 13/986 (1%)
Strand=Plus/Plus
Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111
|| ||| || || | ||| |||| ||| || | |||||| || |||| || ||||| ||
Sbjct 2394904 CAAATGCTCATCTAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAACTTATTGGC 2394963
Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171
|||| ||||| || | || ||||||| || ||| || | || || | ||| ||
Sbjct 2394964 AAACAAGTGGTGT---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCAAAAATGCACAC 2395020
Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231
|| || | ||| || || | ||| || ||||| | || || || | || ||||||||
Sbjct 2395021 CGAGCGCACGTGGACTCCATCGCAGGGAGGGTAGGGGGCACCCTTGGAAACATCACCTTC 2395080
Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291
|||| |||||||| ||||||||||| | || |||||||| || ||||| || |
Sbjct 2395081 AAAGTATTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCGTACTTATG 2395140
Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351
| | || | || || || | || || | ||| | ||||||||| || | ||
Sbjct 2395141 GCTGGCAGAAAGTGAGCCCGGGACTTCAGGAATCCTCTGGATGGTGGCCCAGAGATACTC 2395200
Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411
|| |||||||| ||||| | | ||| ||||| |||| | ||| | | | ||
Sbjct 2395201 ATCAGGGCTGTATGTGTCTTGCGCCCACTCCATAAACTTTTGGATGTTTTCATTCTGTAG 2395260
Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471
|| | || || || | || |||||||| || ||||| || || | |||| |
Sbjct 2395261 TACATACCCCACATACTCCCTACTGACCACAAAGTAGGCACTGCCAGAAAAAAGCGGTGT 2395320
Query 160472 ---GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAG 160528
| | ||| || | |||| | || ||||| | || | ||| || || |
Sbjct 2395321 TTCGAGCGGAGGAAGCAT---TTTGACAGTCCCTGTGTTTGTCAGCTTTCCATTAACGAC 2395377
Query 160529 CGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACT 160588
| | | ||||| |||||||| | || || | |||||| | ||||| || || ||
Sbjct 2395378 CTCATACCGCTTTTTCCACCTTTCTTCTTTATGGGATGGCATCCTCTCCGTTTCCAGGCT 2395437
Query 160589 GTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAA 160648
||| | || | | | || |||| | |||| || |||||||| || || | |||||
Sbjct 2395438 GTTTTCTCCCATTAACAACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAATAGGAAA 2395497
Query 160649 GTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCT 160708
|| |||| || | ||||||| ||||||||| || || |||| | | |||||| |
Sbjct 2395498 ATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGAGGTCCTT 2395557
Query 160709 CATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTT 160768
|||||| || | || ||||| || || ||||| || || || || || |||| | |
Sbjct 2395558 CATGCAGTTGAGGTCAGCCTGAACCCGACTCCATGATGCATAAACCACACTCTCCAATCG 2395617
Query 160769 ACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG--AAAGAAC 160826
|||||||||||||| ||| |||||| || |||| |||| ||| | ||| ||| |
Sbjct 2395618 GCTGGCCACAAAGACATTACTGAAACAGGAAGCGATGCCCATCACTG-CAGCTAAATAGG 2395676
Query 160827 ATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCC 160886
| | || | ||| |||||| || | |||||| | ||||||||| |||||||||
Sbjct 2395677 A-ATCCTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGCATATAGATGGCC 2395735
Query 160887 CTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGA 160946
|| |||| ||| || | ||| || ||||| ||||| | ||| ||||| || ||||| |||
Sbjct 2395736 CTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGCTATTGGA 2395795
Query 160947 AACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAA 161006
||||| | ||| || ||| |||| | | || || || ||||||| ||| ||
Sbjct 2395796 AACTCTGCCTCTTCTTTACTAAGGGGTTCTACAATATATTTGCGTCTCTTGATGAAAGAA 2395855
Query 161007 TCACAATCCCGCGTCATGTTGATATA 161032
||| || | |||||||| |||||
Sbjct 2395856 GTACAGTCACTGGTCATGTTTATATA 2395881
>seq11713
Length=1119413
Score = 185 bits (204), Expect = 1e-41
Identities = 236/324 (73%), Gaps = 2/324 (1%)
Strand=Plus/Plus
Query 168151 ATAGA--GTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCA 168208
||||| || | ||| | | |||| || ||||| || || || || || |||||||| ||
Sbjct 121468 ATAGACCGTGAGGCAGGCTGTTCCTGAGATCTTCCCAGAACCAAAGGTATTGAAGAGACA 121527
Query 168209 CATGAAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAG 168268
|||| | || ||||| ||||||| |||| ||||||| || || | |||| |||| ||||
Sbjct 121528 CATGTAACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGTGTTTTGGAG 121587
Query 168269 GCCCAACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTT 168328
|||| ||| || ||||| | || ||||| | ||| || | || || || |||||
Sbjct 121588 TCCCAGCTGGGTAATGTTTATCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGTT 121647
Query 168329 CTCGCTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTAT 168388
||||||||||||| ||||||| || ||||| || || | |||||||| || || ||
Sbjct 121648 CTCGCTGAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAAT 121707
Query 168389 CAGAACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTC 168448
||| || || | | | ||||| || ||||| | ||||| ||||||| |||| | ||
Sbjct 121708 CAGGACTTCCTGGGCATTTTGCAGAGAGCATCTTAAGGAAGCAGGAGTGTACAGCTGCTC 121767
Query 168449 TCGCTCATCTTGAGTTACGACCTG 168472
|| ||||| || || || || ||
Sbjct 121768 TCTTTCATCCTGGGTCACCACTTG 121791
Score = 84.2 bits (92), Expect = 3e-11
Identities = 151/220 (69%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 167883 GTTTGCCGTATGTCCGTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTT 167942
|||||| | ||| || ||||| |||| || || |||| ||| |||||||| ||
Sbjct 118927 GTTTGCTTAAAGTCAGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCC---TTC 118983
Query 167943 CCTACTTGACTCTTTGGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTG 168002
|| || ||| |||| || ||||| | || | ||||| || ||| ||| || |||||
Sbjct 118984 CCCACCTGATTCTTAGGGTCTTTGATCTGGAGGATGCTGGTAACAGATGTGGTCCCATTT 119043
Query 168003 CGATGTAAAACGGTTTTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATT 168062
| || | | || || || || |||| |||||| | | ||||||||||| ||
Sbjct 119044 GGGTGAGACAGAGTCACTGTACTATTTTCAAACCCTGACCGAGGGACCTTCCAGAAGATC 119103
Query 168063 ACAGGAGCGGGTCGTGCTGTAGCAGAGCAGGTAATATTTA 168102
| || || || || || || |||||||| || || ||||
Sbjct 119104 ATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATGTTTA 119143
>seq8223
Length=1712267
Score = 114 bits (126), Expect = 1e-20
Identities = 220/323 (68%), Gaps = 5/323 (2%)
Strand=Plus/Minus
Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106
|||| |||| | || |||| |||||||| ||| || | ||||| ||| ||| | |||
Sbjct 1623400 TGTCTCAGAAGATCATCCAAACATTGGATGGCAAAGAGGTCAATGTCAATGTCAAGCTTA 1623341
Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166
|| || || | ||||| || | || ||||||| || ||| || | || || | |
Sbjct 1623340 TTGGCAAATAAGTGGTGC---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCAAAAATG 1623284
Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226
|| || || | |||| | || | ||| | |||| |||| ||||| | || |||
Sbjct 1623283 CACACCGAGTGACTGTGGTCCCCATCGCA--GTAGGTAGGGAGCACCTTTGGAAACATCA 1623226
Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286
|| || ||||||||||||| ||||||||||| | || |||||||| || ||| ||
Sbjct 1623225 CCCTCCAAGTACTGCCACTTGACAAACCTGGCAACTGCATGCATGTCAGACAAGTCATAC 1623166
Query 160287 TTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGG 160346
|| | | || | | |||||| || | || |||| ||| | ||| |||| ||
Sbjct 1623165 TTATGGTTTGTGGAGAGTGAACCGGGGACTTCAGGAATACTCTGGATGGTATCCCAGAGA 1623106
Query 160347 TGTTCGTCGGGGCTGTACGTGTC 160369
|| || || ||||||| |||||
Sbjct 1623105 TGCTCATCAGGGCTGTGTGTGTC 1623083
>seq4458
Length=3422643
Score = 96.9 bits (106), Expect = 4e-15
Identities = 197/290 (68%), Gaps = 7/290 (2%)
Strand=Plus/Minus
Query 160097 GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGA 160156
||| || || || || ||||| || || ||| || || |||||||||| ||| || |
Sbjct 3098050 GTCAAACTTGTTGGCCAACAGGTGATG---GTTTTGAAGCATCCAGTGCAAGTCCCCAGC 3097994
Query 160157 CCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTT 160216
||| | || |||| | || ||| | || |||||| | || |||| || ||
Sbjct 3097993 CCCATAAACACAGATAGCCCGCTGGTGGATTCCAGAGCAAGGGGCATAAGGAGCACCCTT 3097934
Query 160217 CGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGA 160276
| | ||| || || | | ||||||||| || | |||||| || | |||||| ||
Sbjct 3097933 ATCGATGTCTCCCTCATGATCCTGCCACTTGACCAGCCTGGCAATAGAAGTCATGTCTGA 3097874
Query 160277 GGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAA--CGCCGGGCATACGCTGTAGG 160334
| ||||||| ||| |||||| | || || | | ||| ||| ||||| |||
Sbjct 3097873 GATGTCGTACTTGGGGTGGTTGGGAACAGAGCCAGGCATCCACCGTGCA--CGCTGAAGG 3097816
Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCAT 160384
|||||||| |||||||| || ||||| || ||||| || |||||| ||
Sbjct 3097815 GTGGCCCAGAGGTGTTCATCAGGGCTATAGGTGTCTTTTACCCATTCAAT 3097766
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577126693407960
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