Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3503 116 7e-21 seq4303 107 3e-18 seq11934 98.7 2e-15 seq3002 93.3 8e-14 seq3381 91.5 3e-13 seq3414 87.8 3e-12 >seq3503 Length=2845972 Score = 116 bits (128), Expect = 7e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | |||| ||| || |||||| ||||| || || || | ||| || Sbjct 460312 ACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCGTCCATCTTCC 460371 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | ||| || ||||||||||| |||||||| ||||| || Sbjct 460372 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 460431 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| || | ||||| || || || || || || Sbjct 460432 ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTC 460491 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| || || || |||||||| Sbjct 460492 CCCGTAAGGGTTTTCACGAAAATCTGCATTTT 460523 >seq4303 Length=4886142 Score = 107 bits (118), Expect = 3e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | |||| ||| || | |||| ||||| || || || | ||| || Sbjct 2814788 ACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCAGACAAAGTCCGTCCATCTTCC 2814729 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | ||| || ||||||||||| |||||||| || || || Sbjct 2814728 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTCTCCTGG 2814669 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || ||||| || | ||||| || || || || || || Sbjct 2814668 ATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTC 2814609 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| || || || |||||||| Sbjct 2814608 CCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2814577 >seq11934 Length=6643911 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | |||| ||| || |||||| ||||| || || || | ||| || Sbjct 5736044 ACGAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCC 5735985 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | ||| || ||||||||||| |||||||| ||||| || Sbjct 5735984 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 5735925 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || | || |||| |||| | || ||||| || | ||| | || || || || || || Sbjct 5735924 ATCTCGGCCTTTACATTTTATATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGTCTTC 5735865 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| | || || || |||| Sbjct 5735864 CCCGTAAGGGTTTTCATGAAAATCTGAGTTTT 5735833 >seq3002 Length=4620727 Score = 93.3 bits (102), Expect = 8e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193155 AGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAAT 193214 ||||| | |||| ||| || ||| || |||| || || || | || || | | Sbjct 2620226 AGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCGTCTTCCAGT 2620285 Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || | || ||||| || | ||| || ||||||||||| |||||||| ||||| || || Sbjct 2620286 TGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 2620345 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| |||| |||| ||||| || | ||||| || || || ||||| || || Sbjct 2620346 TTGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCC 2620405 Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTT 193363 |||| ||||| || || || |||||||| Sbjct 2620406 CTTAGGGTTTTCACGAAAATCTGCATTTT 2620434 >seq3381 Length=5156926 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || ||||| || || ||||| || | ||| || ||||||||||| |||||||| || Sbjct 4775736 ATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 4775795 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| |||| |||| | || | | | ||||| || || || || Sbjct 4775796 ATCCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGAT 4775855 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTT 193362 || || ||||| || ||||| || || || ||||||| Sbjct 4775856 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTT 4775893 >seq3414 Length=2822291 Score = 87.8 bits (96), Expect = 3e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| || || ||||| |||| || | |||||| || || ||||| Sbjct 171804 ATACCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCA 171863 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || || || ||||| || | ||||| || || || Sbjct 171864 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGG 171923 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || ||||||| || | |||| || || || | ||| Sbjct 171924 GGAATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCC 171983 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || || || || || || || || || || || |||||||| Sbjct 171984 ACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 172036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899510219136720