Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq8034 127 3e-24
>seq8034
Length=1360500
Score = 127 bits (140), Expect = 3e-24
Identities = 294/440 (67%), Gaps = 8/440 (2%)
Strand=Plus/Plus
Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217
|| ||||||||| ||||||||| ||||||||| || | ||| | ||| || |
Sbjct 970946 CAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGTTCACTGGAAAATGTGAGG 971005
Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277
|| ||||| | |||| ||| || ||||| ||||||||||| ||| || ||||||||
Sbjct 971006 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAG 971065
Query 18278 ATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAG 18336
|| || || || ||| || || |||| | | |||| || | | | ||| |
Sbjct 971066 ATGCCTTCCACTGCA-GCAAAGGCTACGACACGTTCACCATAGGTAGCCTCTTTGTCCCC 971124
Query 18337 TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396
||||| ||||| ||| | | | ||| || || | || || |||||
Sbjct 971125 AATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATT 971184
Query 18397 AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACAT 18456
|| | | || ||||||||| |||||||| |||||||| || | | | ||||||
Sbjct 971185 GAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCAATAAGAAGACTATACAT 971244
Query 18457 TTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATA 18516
||||||||||||| ||||||| || || || || | ||| || | | || || | |
Sbjct 971245 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAAT 971304
Query 18517 TTGAA--TC-TCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573
|||| || | ||| ||||| || ||||| || ||||| ||||| || || |
Sbjct 971305 CTGAACTTCTTGGCT---AAATCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGC 971361
Query 18574 TGCGAAAAATGCCAAAACAT 18593
||| || || |||| |||||
Sbjct 971362 TGCAAAGAAAGCCAGAACAT 971381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731754708363600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |