Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq8034 127 3e-24 >seq8034 Length=1360500 Score = 127 bits (140), Expect = 3e-24 Identities = 294/440 (67%), Gaps = 8/440 (2%) Strand=Plus/Plus Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 || ||||||||| ||||||||| ||||||||| || | ||| | ||| || | Sbjct 970946 CAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTGATAAGTTCACTGGAAAATGTGAGG 971005 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 || ||||| | |||| ||| || ||||| ||||||||||| ||| || |||||||| Sbjct 971006 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAG 971065 Query 18278 ATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAG 18336 || || || || ||| || || |||| | | |||| || | | | ||| | Sbjct 971066 ATGCCTTCCACTGCA-GCAAAGGCTACGACACGTTCACCATAGGTAGCCTCTTTGTCCCC 971124 Query 18337 TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396 ||||| ||||| ||| | | | ||| || || | || || ||||| Sbjct 971125 AATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATT 971184 Query 18397 AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACAT 18456 || | | || ||||||||| |||||||| |||||||| || | | | |||||| Sbjct 971185 GAAGAGAAATTCCCTTTCTTTGGGATCTTTTAGGTAAGTGTCAATAAGAAGACTATACAT 971244 Query 18457 TTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATA 18516 ||||||||||||| ||||||| || || || || | ||| || | | || || | | Sbjct 971245 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAAT 971304 Query 18517 TTGAA--TC-TCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573 |||| || | ||| ||||| || ||||| || ||||| ||||| || || | Sbjct 971305 CTGAACTTCTTGGCT---AAATCGCTCCACCAAGTTTTCATTTACTATGCCATCGCTTGC 971361 Query 18574 TGCGAAAAATGCCAAAACAT 18593 ||| || || |||| ||||| Sbjct 971362 TGCAAAGAAAGCCAGAACAT 971381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731754708363600