Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3503 136 8e-27 seq4303 127 4e-24 seq11934 123 5e-23 seq7746 120 6e-22 seq3214 118 2e-21 seq3959 102 2e-16 seq3002 102 2e-16 seq3381 91.5 3e-13 >seq3503 Length=2845972 Score = 136 bits (150), Expect = 8e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || |||| Sbjct 460293 ACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 460351 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 460352 ACAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 460411 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||| | ||| || | ||| | Sbjct 460412 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 460471 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| | || ||||||||||| Sbjct 460472 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 460523 >seq4303 Length=4886142 Score = 127 bits (140), Expect = 4e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || |||| || |||| Sbjct 2814807 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAC-TATTGTAGTCAG 2814749 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 2814748 ACAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 2814689 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| || || || || || |||||||| ||| | ||| || | ||| | Sbjct 2814688 GAATTCCTTCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 2814629 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| | || ||||||||||| Sbjct 2814628 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2814577 >seq11934 Length=6643911 Score = 123 bits (136), Expect = 5e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || |||| Sbjct 5736063 ACCACCACGAAGTCTCAACACGAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 5736005 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| | Sbjct 5736004 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 5735945 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || | |||||||| ||| | ||| || | ||| Sbjct 5735944 GAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTATATCGTATCCGAGGGTTCAG 5735885 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| || || ||||| |||| Sbjct 5735884 CCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCATGAAAATCTGAGTTTT 5735833 >seq7746 Length=1950873 Score = 120 bits (132), Expect = 6e-22 Identities = 168/232 (72%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || ||||| || |||| Sbjct 468093 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAG 468151 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || | | |||| |||| ||| || ||||||||||| ||| || ||| |||| | Sbjct 468152 ACAAAGTCCATGCATCTTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAG 468211 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || | |||||||| ||| | ||| || | ||| | Sbjct 468212 GAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAA 468271 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || || || ||||| || || || | ||||| || || ||||||||||| Sbjct 468272 CATCGAGGGTGATGGTCTT-CCCGTAAGGGTTTTCATGAAAATCTGCATTTT 468322 >seq3214 Length=3208335 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || ||||| | ||||| |||||| ||||| || ||||| || || ||| |||| Sbjct 1956892 AACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCT 1956833 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 |||| ||| || ||||||||||| |||||| || |||| || |||||||| ||| | Sbjct 1956832 TCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATTCCTTCCTTAACC 1956773 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || || || |||||||| ||| | ||| || | ||| || || || || ||||| Sbjct 1956772 TGGATCTTGGCCTTTACATTTTATATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTC 1956713 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || | ||| | | || ||||||||||| Sbjct 1956712 TTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 1956678 >seq3959 Length=5346552 Score = 102 bits (112), Expect = 2e-16 Identities = 166/234 (71%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| || || | ||| | ||||| ||| ||| || || | || |||| Sbjct 2300668 ACCACCACGAAGTGTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTG-TAGTCAG 2300611 Query 192368 ATAATGTTCGTTCATCATCCAATTG--TTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | || || | | |||| |||| ||| ||| | ||||||||| | ||| || |||||| Sbjct 2300610 ACAAAGTACATCCATCCTCCAGTTGCTTTTGCTAGCAAAGATCAGTCTTTGCCCATCAGG 2300551 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || |||||||| ||||| || || || |||||||| | | | |||||| | ||| Sbjct 2300550 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCTGAGGGTTC 2300491 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || || || ||||| || || || | ||||| || || ||||||||||| Sbjct 2300490 AACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCATGAAAATCTGCATTTT 2300437 >seq3002 Length=4620727 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 192333 ATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATT 192391 ||| | ||||| ||| ||| || || || | ||||| || || ||| | || |||| || Sbjct 2620228 ATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGACAAAGTACGTCCGTCTTCCAGTT 2620286 Query 192392 GTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTT 192451 | | ||||||||||| | ||| || |||||||| || |||||||| ||||| || || | Sbjct 2620287 GCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCT 2620346 Query 192452 TATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAG 192511 | |||||||| | | |||||| | ||| || || || || || || || || Sbjct 2620347 TGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCCC 2620406 Query 192512 TTAATGTTTTAATAAATATCTGCATTTT 192539 ||| ||||| | || ||||||||||| Sbjct 2620407 TTAGGGTTTTCACGAAAATCTGCATTTT 2620434 >seq3381 Length=5156926 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 13/231 (6%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || || || || |||| Sbjct 4775675 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAG 4775733 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | |||| |||||||| || ||||||||||| | ||| || |||||||| | Sbjct 4775734 A-----------CATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 4775782 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| | | | | | | ||| | Sbjct 4775783 GAATTCCTTCCTTATCCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAA 4775842 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 | || || || ||||| || || || | ||||| | || |||||||||| Sbjct 4775843 CCTCAAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTT 4775893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984318280393350