Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq3503 136 7e-27
seq4303 127 4e-24
seq7746 118 2e-21
seq3214 118 2e-21
seq3002 109 1e-18
seq3959 102 1e-16
seq7646 87.8 3e-12
>seq3503
Length=2845972
Score = 136 bits (150), Expect = 7e-27
Identities = 174/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || ||||||
Sbjct 460284 TTTCTTAGCACCACCACGAAGTCTCAAAACAAGATGAAGAGTAGACTCCTTTTGAATATT 460343
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || | ||| || ||
Sbjct 460344 GTAGTCAGACAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 460403
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||| ||
Sbjct 460404 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 460463
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 460464 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 460523
>seq4303
Length=4886142
Score = 127 bits (140), Expect = 4e-24
Identities = 172/240 (72%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || | ||||
Sbjct 2814816 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGACTATT 2814757
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || | ||| || ||
Sbjct 2814756 GTAGTCAGACAAAGTCCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 2814697
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| || || || || || |||||||| ||| ||||| ||
Sbjct 2814696 ATCAGGAGGAATTCCTTCCTTCTCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 2814637
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 2814636 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2814577
>seq7746
Length=1950873
Score = 118 bits (130), Expect = 2e-21
Identities = 171/240 (71%), Gaps = 1/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || ||||||
Sbjct 468084 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 468143
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| | | | || |||| ||| || |||||||| || ||| || ||
Sbjct 468144 GTAGTCAGACAAAGTCCATGCATCTTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTG 468203
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
|||| || |||||||| ||||| || || | |||||||| ||| ||||| ||
Sbjct 468204 AGCAGGAGGAATTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCGTATCCGA 468263
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||||| ||||| |||||||||||
Sbjct 468264 GGGTTCAACATCGAGGGTGATGGTCTTCCC-GTAAGGGTTTTCATGAAAATCTGCATTTT 468322
>seq3214
Length=3208335
Score = 118 bits (130), Expect = 2e-21
Identities = 170/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || | |||| | |||| || || ||||| | ||||| |||||| ||||||
Sbjct 1956917 TTTCTTAGCAGCACCACGGAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATT 1956858
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || |||||| |
Sbjct 1956857 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCG 1956798
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
|||| || |||||||| ||| | || || || |||||||| ||| ||||| ||
Sbjct 1956797 ACCAGGAGGAATTCCTTCCTTAACCTGGATCTTGGCCTTTACATTTTATATCGTATCCGA 1956738
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||| | | ||| |||||||||||
Sbjct 1956737 GGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 1956678
>seq3002
Length=4620727
Score = 109 bits (120), Expect = 1e-18
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || | |||| | ||||| || | | ||| | ||||| ||| || ||| ||
Sbjct 2620195 TTTCTTAGCAACACCACAAAGTCTCAACAAAAGATGAAGAGTAGGCTCCTTTTGAATGTT 2620254
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
| || || |||| ||| |||| |||| ||| | |||||||| || | ||| || ||
Sbjct 2620255 GCAGTCAGACAAAGTACGTCCGTCTTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTG 2620314
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| | ||||||||
Sbjct 2620315 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGCCGTATCTGA 2620374
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || || || || || ||| ||||| | ||| |||||||||||
Sbjct 2620375 GGGTTCAACCTCAAGGGTGATAGTCTTCCCCCTTAGGGTTTTCACGAAAATCTGCATTTT 2620434
>seq3959
Length=5346552
Score = 102 bits (112), Expect = 1e-16
Identities = 169/242 (70%), Gaps = 3/242 (1%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | |||| || || | ||| | ||||| ||| || ||| |
Sbjct 2300677 TTTCTTAGCACCACCACGAAGTGTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTG 2300618
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTG--TTTACCAGCAAAAATTAATCTCTGT 171950
|| || || |||| | | | || |||| ||| ||| | |||||| || | ||| ||
Sbjct 2300617 -TAGTCAGACAAAGTACATCCATCCTCCAGTTGCTTTTGCTAGCAAAGATCAGTCTTTGC 2300559
Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010
||||| || |||||||| ||||| || || || |||||||| | | ||||||
Sbjct 2300558 CCATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCT 2300499
Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| | ||| || || || || ||||| || || || | ||||| ||||| |||||||||
Sbjct 2300498 GAGGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCATGAAAATCTGCATT 2300439
Query 172071 TT 172072
||
Sbjct 2300438 TT 2300437
>seq7646
Length=2119593
Score = 87.8 bits (96), Expect = 3e-12
Identities = 161/234 (69%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | ||||| || || | | |||| | ||| || ||| ||||| || ||
Sbjct 2020540 ACCACCACAAAGTCTCAACACAAGAC---AAGTGGACTCCTTTTGAATGTTATAGTCAGA 2020484
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT---CTGTTGGTCAGG 171958
|||| | | |||| |||| ||| || |||||||| || | ||| || ||||||||
Sbjct 2020483 CAAAGCACATCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTACTACTGGTCAGG 2020424
Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018
| |||||||| ||||| || || || ||||||||| | | |||| | | |||
Sbjct 2020423 AGAAATTCCTTCCTTATCCTGGATCTTGGCTTTTACATT--TCCTTGTATTCAAGGGTTC 2020366
Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || |||| |||| ||| | | || | | | ||||| |||||||||||
Sbjct 2020365 AACCTCAAGAGCGATGGCTTTCTCCATAAAGGGTGTTATGAAAATCTGCATTTT 2020312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904990940641800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |