Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8034 127 6e-24 seq6824 87.8 5e-12 >seq8034 Length=1360500 Score = 127 bits (140), Expect = 6e-24 Identities = 366/554 (66%), Gaps = 12/554 (2%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || ||||| || || || |||| || |||||||||||||| || | | | | Sbjct 971529 TTTGTCATCTTCCCCATCGAGTACCACGATATCTGGCAGATGTATAAGAAGGCGGAGGCT 971470 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGAC--CCAGCCCACTGGGAAGCCC 133193 | || ||||| | || || || | ||||| ||| ||| ||||||||| ||| Sbjct 971469 TCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGGACATTCAG--CACTGGGAATCCC 971412 Query 133194 TTACTGGGGATGAAAAACATTTTAT-TTCTATGATTTTAGCGTTTTTTGCTGCGAGTGAT 133252 | | || || | | ||||||| ||| ||| || | || || ||||| || || ||| Sbjct 971411 TGAAGCCCGAGGAGAGATATTTTATATTCCATG-TTCTGGCTTTCTTTGCAGCAAGCGAT 971353 Query 133253 GGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCC 133312 || || || |||||| || | || |||| ||||||||| | | |||||| Sbjct 971352 GGCATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATTACAGAAGCC 971293 Query 133313 CGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACT 133372 || || ||||| | || ||||| |||||||| || |||||| | ||| | | Sbjct 971292 CGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTT 971233 Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--A 133430 || ||||| |||||| | |||||| || | | | | || ||||| |||||| | Sbjct 971232 CTTATTGACACTTACCTAAAAGATCCCAAAGAAAGGGAATTTCTCTTCAATGCCATTGAA 971173 Query 133431 GCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490 ||| | |||||| | || ||||| | || ||||| | ||||| |||||| Sbjct 971172 ACGA--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAG 971115 Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550 || | | || | ||| |||| || ||||||| ||| || ||||| || || | Sbjct 971114 AGGCTACCTATGGTGAACGTGTCGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCG 971055 Query 133551 GTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTT 133609 || | || ||| || || || ||||| || || || || | | ||||| || ||| Sbjct 971054 GTTC-TTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTT 970996 Query 133610 TCTAACGAACTTAT 133623 || | |||||||| Sbjct 970995 TCCAGTGAACTTAT 970982 >seq6824 Length=4359853 Score = 87.8 bits (96), Expect = 5e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || ||||| || ||||| || || ||||||| ||||| || || Sbjct 1357738 ACCAGTCTCAGCAGTCTTGACAGCCGTGTCAATGAGCCCCTCACGACCCCCCATGGCGTG 1357797 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 ||| || | ||| || || || | | ||||| |||| || || ||||| Sbjct 1357798 GAAAAAGAACTCGGTGGGGGTGAGGCCGGCTAGGTAGGAGTTCTCCACAAAGCCACGGCT 1357857 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||||||| || ||| |||| | ||||| ||||| |||| || || |||| |||| Sbjct 1357858 CTCGGGCCCATAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATGG 1357917 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839 || || || || || ||||||||||| || | | | ||| | ||| |||| Sbjct 1357918 AATCCGTTTGCCCTCCACGTTCTGCTGCCCGACGACAGCAATGACCTGGGAAA 1357970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471575825902677