Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3503 113 3e-20 seq4303 111 1e-19 seq3002 107 1e-18 seq3414 100 2e-16 seq3381 95.1 9e-15 seq7746 93.3 3e-14 seq3214 93.3 3e-14 seq3144 93.3 3e-14 seq11934 87.8 1e-12 seq3525 87.8 1e-12 >seq3503 Length=2845972 Score = 113 bits (124), Expect = 3e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || || || |||||||| || || || | | || || ||| || ||||| Sbjct 460317 ATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCGTCCATCTTCCAGTTG 460376 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | |||| |||||||||||| || ||||| || || || || || | || Sbjct 460377 CTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 460436 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| |||||| || || || |||| || || || || || || || || || Sbjct 460437 GGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGT 460496 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||| || || ||||||||||| Sbjct 460497 AAGGGTTTTCACGAAAATCTGCATTTT 460523 >seq4303 Length=4886142 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||| | || || || | | || || ||| Sbjct 2814792 CAACACAAGATGAAGAGTAGACTCCTTTTGACTATTGTAGTCAGACAAAGTCCGTCCATC 2814733 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 2814732 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTCTC 2814673 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || |||| || || || || || || Sbjct 2814672 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 2814613 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| || || ||||||||||| Sbjct 2814612 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2814577 >seq3002 Length=4620727 Score = 107 bits (118), Expect = 1e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || | || ||||||||||| | || | | || || || || ||||| Sbjct 2620228 ATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCGTCTTCCAGTTG 2620287 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 | ||||||| | |||| |||||||||||| || ||||| || || || || || | || Sbjct 2620288 CTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 2620347 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| ||||| | || || || |||| || ||||| || ||||| || || | Sbjct 2620348 GGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCCCT 2620407 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 || |||||| || || ||||||||||| Sbjct 2620408 TAGGGTTTTCACGAAAATCTGCATTTT 2620434 >seq3414 Length=2822291 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||||| |||| || || || || ||||| || ||||| || || | | Sbjct 171807 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 171866 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| ||| | || | || ||||| || || ||| Sbjct 171867 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 171926 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || || || | ||| || ||| |||| | |||||| | || || Sbjct 171927 ATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 171986 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || || || ||||| || | ||| || || || ||||||||||| Sbjct 171987 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 172036 >seq3381 Length=5156926 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/216 (69%), Gaps = 13/216 (6%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA-AT 29632 || ||| | |||||| || || || ||||||||||| || || ||| || Sbjct 4775690 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTC------------AGACAT 4775737 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || | ||| ||||||||| | |||| |||||||||||| || ||||| || || || | Sbjct 4775738 CTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 4775797 Query 29693 CTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 | || | || || ||| ||||| |||| | |||| || ||||| || || | Sbjct 4775798 CCTGGATATTGGCCTTTACATTTTCTGTTGTGTTCAAGGGTTCAACCTCAAGGGTGATGG 4775857 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 | || || || | |||||| || || |||||||||| Sbjct 4775858 TCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTT 4775893 >seq7746 Length=1950873 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||||| || || || | | || | | ||| Sbjct 468108 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCATGCATC 468167 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | ||| |||||||||| | || ||||| || || || || Sbjct 468168 TTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTGAGCAGGAGGAATTCCTTCCTTATC 468227 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | | || ||| |||||| || || || |||| || || || || || || Sbjct 468228 CTGGATCTCGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACATCGAGGGTGATGGT 468287 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| | || ||||||||||| Sbjct 468288 CTTCCC-GTAAGGGTTTTCATGAAAATCTGCATTTT 468322 >seq3214 Length=3208335 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| |||||||| || || ||||||||||| || || || | | || || ||| Sbjct 1956893 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 1956834 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | ||| ||| ||| || | || ||||| || || || | Sbjct 1956833 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCCGACCAGGAGGAATTCCTTCCTTAAC 1956774 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| ||| || || || || |||| || || || || || || Sbjct 1956773 CTGGATCTTGGCCTTTACATTTTATATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 1956714 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||| | || || ||||||||||| Sbjct 1956713 CTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 1956678 >seq3144 Length=887747 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 29573 GCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAAT 29632 |||| |||| || | ||||| | |||||| ||||| || || | | |||| || Sbjct 249305 GCAGAACCAGGTGCACGGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGCAGCCAT 249364 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || || || ||||||||| |||||| | ||||| || || || ||||||||||||| Sbjct 249365 CCTCCAGCTGCTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCTTTGT 249424 Query 29693 CTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 |||| |||||| | ||||| | | || |||| | | || || ||||| | || Sbjct 249425 CTTG-AATTTTGGCTTTGAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGATGATG 249483 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| | ||||| | |||||| Sbjct 249484 GTCTTGCCCGTGAGGGTCTCCACAAAGAGCTGCAT 249518 >seq11934 Length=6643911 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||||| || || || | | || || ||| Sbjct 5736048 CAACACGAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 5735989 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 5735988 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 5735929 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | | || ||| ||| || || || || |||| | || || || || || Sbjct 5735928 CTGGATCTCGGCCTTTACATTTTATATCGTATCCGAGGGTTCAGCCTCGAGGGTGATGGT 5735869 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| | || ||||| |||| Sbjct 5735868 CTTCCCCGTAAGGGTTTTCATGAAAATCTGAGTTTT 5735833 >seq3525 Length=3185992 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 29562 TCCCCTCAAACGCA--GCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| |||||| || || ||||| ||||| || ||||||||||| | | Sbjct 2397065 TCACCTCAGAGGCAAAGCACCACCTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAA 2397006 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || | |||||||| || |||||| ||||| || || || Sbjct 2397005 AGAGTGTGGCCATCCTCCAACTGTTTGCCCACAAATATCAGATGCTGCTGGTCAGGTGGG 2396946 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || ||||||| |||| |||||| | | || Sbjct 2396945 ATGCCCTCCTTGTCATGGATCTTGGCTTTGACATTTTCACTGGTGTCACTGGGCTGGACC 2396886 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || ||| | || || | ||| || ||| | |||||||| Sbjct 2396885 TCAAAGGTGATGGTTCTTCCTGTGAGGGTCTTTACAGAGATCTGCAT 2396839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385159007212761