Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq8034 259 4e-64 seq9112 210 2e-49 seq9712 113 4e-20 seq7379 98.7 8e-16 seq769 91.5 1e-13 seq4492 86.0 5e-12 seq9157 82.4 6e-11 >seq8034 Length=1360500 Score = 259 bits (286), Expect = 4e-64 Identities = 430/614 (70%), Gaps = 9/614 (1%) Strand=Plus/Minus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||| | |||||| || | |||||| | || || || | || || || || |||| Sbjct 971552 TGCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTCCCCATCGAGTACCACGATATCTGGC 971493 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAG 43796 | ||||| || || || |||| || || ||||| || || || || || || | || | Sbjct 971492 AGATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGG 971433 Query 43797 ACTT--AGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTT 43854 || | ||||| | ||| | | | || || | || | | ||||||||| ||| | Sbjct 971432 ACATTCAGCAC-TGGGAATCCCTGAAGCCCG-AGGAGAGATATTTTATATTCCATGTTCT 971375 Query 43855 GGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCA 43914 ||| || ||||| || ||||| || ||||| |||||||| ||||| || ||| || Sbjct 971374 GGCTTTCTTTGCAGCAAGCGATGGCATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCA 971315 Query 43915 AGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 ||||||||| ||||| |||||| || ||||| ||||| || ||||||||||| ||||| | Sbjct 971314 AGAAGTTCAGATTAC-AGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACA 971256 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033 | ||||| |||||||| |||||||| || || || ||| | |||||| | || | | Sbjct 971255 TACATTCTGAAATGTATAGTCTTCTTATTGACACTTACCTAAAAGATCCCAAAGAAAGGG 971196 Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCC 44093 | | || ||||| || ||||| | ||| | || | || ||||| |||||| Sbjct 971195 AATTTCTCTTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCT 971136 Query 44094 TTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTG 44150 | ||||| | | | | | | | ||| ||||| | || || ||||| | | Sbjct 971135 TGCGCTGGATTGGGGACAAAGAGGCTACCTATGGTGAACGTGTCGTAGCCTTTGCTGCAG 971076 Query 44151 TGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210 |||||||||| |||||||| || || ||||| | ||||| ||| | ||||||||||| Sbjct 971075 TGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGGCTCAAGAAACGAGGAC 971016 Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270 |||||||||| | || ||||| | ||| | || || | ||||| || ||||| || | Sbjct 971015 TGATGCCTGGCCTCACATTTTCCAGTGAACTTATCAGCAGAGATGAGGGTTTACACTGTG 970956 Query 44271 ATTTTGCTTGCTTG 44284 ||||||||||| || Sbjct 970955 ATTTTGCTTGCCTG 970942 >seq9112 Length=1254116 Score = 210 bits (232), Expect = 2e-49 Identities = 597/899 (66%), Gaps = 40/899 (4%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | || || | | || ||||| || ||||| ||||| || || || | || Sbjct 510677 TTTGTCATCTTCCCCACCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCT 510736 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGAC--TTAGCACATTGGATTGCAT 43817 || || ||||| || || || || || || | || ||| || |||| | ||| | | | Sbjct 510737 TCCTTCTGGACCGCGGAGGAGGTGGACCTGTCCAAGGACATTTGGCAC-TGGGAATCCCT 510795 Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 || || | || | | ||||| |||| ||| ||| || |||| || || || | Sbjct 510796 GAAGCCCG-AGGAGAGAGATTTTCTATCCCATGTTCTGGTTTTCTTTGTAGCAAGTGATG 510854 Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCAC 43937 | ||||| |||| ||| ||||| || | | ||||||||||| | ||||||| | Sbjct 510855 GCATAGTAAATGCAAACTTGGTGGAGCGATGTAGCCAAGAAGTTCAGGTGACAGAAGCCC 510914 Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997 | ||||| | ||| || ||||||||||| ||||| || ||||| | |||||| ||| | | Sbjct 510915 GCTGTTTCTGTGGCTTCCAAATTGCCATGGAAAACATACATTCTGGAATGTATAGTTTCC 510974 Query 43998 TGATAGATACGTACATCAAAGATGGGCACGAGAAGCA---TCGATTGTTTAATGCGATAG 44054 | || || || ||||| |||||| | || | | | ||| || ||||| || | Sbjct 510975 TTATTGACACTTACATAAAAGATCCCAAAGAAAGGGAATTTCG---CTTCAATGCCATTG 511031 Query 44055 AAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGA-TAAATTCAAA- 44112 |||| | ||| | || | || ||||| |||||| | | |||| | |||| Sbjct 511032 AAACGATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAG 511091 Query 44113 -TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG 44171 | | | | ||| ||||| |||| | ||||| | |||||||| ||||||| | Sbjct 511092 CAGCTACCTATGGGGAACGTGTTGTAGTCTTTGCTACAGCGGAAGGCA---TCTTTTCTG 511148 Query 44172 GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTT 44231 | | ||||| | ||||| ||| | ||||||||||| |||||||||| | || |||| Sbjct 511149 GTTATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACCTTTT 511208 Query 44232 CAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTG 44291 | ||||| | || ||| | ||||| || ||||| || | |||||||||| || | || Sbjct 511209 CCAATGAACTTATTAGTGGAGATGAGGGTTTACACTGTGGTTTTGCTTGCCTGAT-GTTC 511267 Query 44292 GAT-ATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCA 44350 || | || | | || | | || | | ||| ||| | ||| | || | | || Sbjct 511268 AATCACCTGGCACAC-AAACCACTGGAGG--AGAGAATAAGAGAAAGAATTATCAATGCT 511324 Query 44351 GTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA- 44409 || ||||||||| ||||| | || || || ||||| || | || || ||||| Sbjct 511325 GTTCGGATAGAACAGGAATTCCTCACTGAGGCCTTGCCTGTGAAGCTCATTGGGATGAAT 511384 Query 44410 TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTAC-TTTTGGAACTGG 44468 || || | | ||||| ||||| ||||| | | ||||| | || | |||||||| Sbjct 511385 TGCAC-TCTAATGAAGCAATACATTGAGTCTGTGGCAGACAG---ACATGCCGGAACTGG 511440 Query 44469 GTTGCGATAAACACTATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCG 44524 ||| | | || | || ||| | ||||| ||||| |||||||| |||||||| Sbjct 511441 GTT----TTAGCAAGGTTTTCAGAGTAGAGAACCCATTTGACTTTATGGAGAATATTTCA 511496 Query 44525 TTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGT 44583 || ||| || ||||| ||||| || | || || |||||| | ||||| || Sbjct 511497 CTGAAAG-----ACGAACTTCTTTGAGAAGAGAGTAAAGGAGTATCAGAGGATGGGAGT 511550 >seq9712 Length=6868699 Score = 113 bits (124), Expect = 4e-20 Identities = 92/109 (84%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 ||||||||||| ||||| |||||| || ||||| ||||| || ||||||||||| ||||| Sbjct 3788609 CAAGAAGTTCAGATTAC-AGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAA 3788551 Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| |||||||| |||||||| || || || ||||| |||||| Sbjct 3788550 CATACATTCTGAAATGTATAGTCTTCTTATTGACACTTACATAAAAGAT 3788502 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || ||||| |||| || ||||| | ||||||||||| |||||||| || || ||||| Sbjct 3777460 GGTGAACGTGTTGTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCA 3777401 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| | Sbjct 3777400 TCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTT 3777341 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 3777340 ATCAGCAGAGATGA 3777327 >seq7379 Length=6738282 Score = 98.7 bits (108), Expect = 8e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| || || ||| | || ||||| || || || |||| |||| Sbjct 5240014 TGATGGCACTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAACAGTGAGCTGT 5239955 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || |||| || ||||| || |||||||| ||||| || || || ||||| || | Sbjct 5239954 CCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTAGGTGTGCCTTTCAACATTGCCA 5239895 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | || || ||||||||||| |||||||| ||| Sbjct 5239894 GCTACGCCCTGCTCACGTACATGATTGCGCAC 5239863 >seq769 Length=520038 Score = 91.5 bits (100), Expect = 1e-13 Identities = 215/321 (67%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 77243 GCTCCCTCTCGTGCCAGCCGGTCGGCCTCCTCATTGCCTTTGTATCCTGCGTGTCCTGGG 77302 ||||| |||| || | | || || || ||||||||| | |||| | || || || Sbjct 166616 GCTCCTTCTCTGGCTAATCTATCAGCTTCTTCATTGCCTATAAATCCCGAATGACCAGGA 166675 Query 77303 ATGTGCAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCC 77362 | ||||| ||| || |||| | || |||| ||||| || ||||| || Sbjct 166676 ACGTGCATCCACTGAATGTCCATCCCCTGGCTGAGCCTCTCCAGTGCCACGAAGTCCTCT 166735 Query 77363 TTGTTGA-CAACTGACCCTCCGC-CATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAA 77420 ||||||| || || | | || | || | |||| || || | |||||| | | || Sbjct 166736 TTGTTGATCACCTCTTTCCCTGCACTTGT--CTTCCACCCATTTTCCTTCCAACTTTGAA 166793 Query 77421 CCCACTTAGTCACACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGA 77480 | || ||||| | |||||| || || ||||| |||||||| || | ||||| || ||| Sbjct 166794 CACAGTTAGTTATACCATTTATAGTAAACATACTGTCTGTATACAGAACCAGTTTACTGA 166853 Query 77481 TTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGGATGCAGCCTGGATTTCAGCGCGCTGGT 77540 | || | ||| ||||||| | | |||| | || || || ||||| || | |||| Sbjct 166854 TGTTTTGAGCCTTTGCTTGTTCAATGGTTTTGCAGGCTGCATGAATTTCTGCTCTTTGGT 166913 Query 77541 TTGTCTGTTGCCCCACAAGTC 77561 |||||||| |||| ||||| Sbjct 166914 TTGTCTGTCGCCCAGGAAGTC 166934 >seq4492 Length=3487830 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 1711393 AAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 1711334 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| || |||||||| Sbjct 1711333 AACGAGTTTCGGAGTATCAGCG 1711312 >seq9157 Length=1191931 Score = 82.4 bits (90), Expect = 6e-11 Identities = 115/162 (71%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 19540 AAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT 19599 || ||| ||||||||| || || | |||||| | || || ||||| ||||| ||||| Sbjct 520288 AACAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGAGGG 520229 Query 19600 T------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653 ||||| | ||||| ||||||||||||||||| || | ||||| ||| | Sbjct 520228 AGCATGGCTGGTAGCACGGGAGTTCATGACACTGTTGTCAACCAGTTGCTGTCCAAAATT 520169 Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATG 19695 || || || | || || ||||| || |||| ||||| ||| Sbjct 520168 GATGGCGTGGAGCAGCTAAATAACATCCTAGTCATTGGTATG 520127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397393895140105