Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq11512 86.0 8e-12 seq6158 86.0 8e-12 >seq11512 Length=1405628 Score = 86.0 bits (94), Expect = 8e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 32674 TGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGA 32733 |||||| || ||| | |||||||| | || ||| | || || | || || || ||| Sbjct 564656 TGTGGTGGTACTTTGTTTCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGA 564597 Query 32734 GAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTT 32793 |||||||| ||||| ||| || | || || || || || | ||| |||||||| | Sbjct 564596 GAAAGAAAAACAACCAGGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCT 564537 Query 32794 TAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 | | ||||| || ||||| ||| ||||||||||||| Sbjct 564536 TGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 564500 >seq6158 Length=9241946 Score = 86.0 bits (94), Expect = 8e-12 Identities = 234/357 (66%), Gaps = 15/357 (4%) Strand=Plus/Plus Query 22580 GGATCCAAAACCA---GAACCCCCTCTTTCTGTGATACTCAATTCTTCCACAGTCTTTAC 22636 ||| ||||||||| ||||||| |||| ||| | ||| ||| ||| || Sbjct 4167040 GGAACCAAAACCACCTGAACCCC---TTTCGGTGTCATCCAAAGCTTGAACA------AC 4167090 Query 22637 TTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCCTT 22696 |||| |||||||||| || ||| | || || ||||| | || ||| ||||| Sbjct 4167091 TTCT---ATTTCTGGATAAAAAATCCGTTCGCAAATGAGCTGTGCAATTCGATCACCCTT 4167147 Query 22697 ATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTGTA 22756 || || | ||| || || | ||||||||| | | | ||| | |||||| || || Sbjct 4167148 TTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTATA 4167207 Query 22757 ATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGATCT 22816 |||| || ||| ||||| || |||||||| ||||| || || ||||| || || Sbjct 4167208 ATCTTCATTTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCTGACTG 4167267 Query 22817 AGGAGATATTCTTCCATATAATCCTTCCGGTATATCTATTATAATATCAGTCATTACTAA 22876 |||| || ||||||||| | || || | |||| ||| || || | || | Sbjct 4167268 TGGAGCTACTCTTCCATAACACCCAGAAGGGAGCGCTATCTGAATGTCCGTTTTCACAAG 4167327 Query 22877 TTGTTTACCCATAGGTTCTATTACGTAATTATACGCGCTATATAGATCATATCCTGC 22933 ||| |||||||| |||| ||||| ||| || || || || || || || || Sbjct 4167328 AGCTTTCTCCATAGGTGGTATTGTGTAATCATAGGCACTGTACAGGTCGTAGCCCGC 4167384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603084132737040