Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq7379 129 5e-25 seq8879 114 1e-20 seq4880 111 1e-19 seq3669 102 7e-17 seq4614 91.5 1e-13 seq7169 82.4 6e-11 >seq7379 Length=6738282 Score = 129 bits (142), Expect = 5e-25 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||||||||| || | ||||||||| ||||| || || Sbjct 5239852 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCAATGTTGAAAGGC 5239911 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || |||||||| ||||| |||||||| ||||| || || ||||| | || | Sbjct 5239912 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 5239971 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 || || ||||| || | ||| ||||| ||||| || ||||| || Sbjct 5239972 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAG 5240015 Score = 118 bits (130), Expect = 9e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| ||||| || ||||||||||||||||| || || || || |||| ||| Sbjct 5244501 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTC 5244560 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 || ||||| ||| ||| ||| ||||||||||||||| ||| || ||||| || Sbjct 5244561 CCCTTCTTCTCTGGCGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATC 5244620 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||||| || || ||||| ||| |||||||| | ||||| || || Sbjct 5244621 CCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTAGATCC 5244668 >seq8879 Length=1913551 Score = 114 bits (126), Expect = 1e-20 Identities = 189/267 (71%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 770579 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 770520 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 770519 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 770460 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 770459 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 770401 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 110616 || || |||| ||||| || || || || |||||||||||| ||||| || Sbjct 770400 TGAG------CGGTGGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGG-GAC 770348 Query 110617 GCGGCCACGATACCGTTCAG--AATGA 110641 | || ||||| | ||| || ||||| Sbjct 770347 ACAGCGACGATGCAGTTTAGCAAATGA 770321 >seq4880 Length=3737892 Score = 111 bits (122), Expect = 1e-19 Identities = 173/241 (72%), Gaps = 10/241 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 3631568 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 3631509 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 3631508 TAAAGGTCAATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 3631449 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 3631448 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 3631390 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 110615 | ||| | |||| ||||| || | ||| || |||||||||||| ||| ||||| Sbjct 3631389 TGA-----GCA-GTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGGGACA 3631336 Query 110616 C 110616 | Sbjct 3631335 C 3631335 >seq3669 Length=4562161 Score = 102 bits (112), Expect = 7e-17 Identities = 170/241 (71%), Gaps = 10/241 (4%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| || || || || |||| |||||||| |||| || || || || | Sbjct 3050851 ATGAGCTCCTTGTGGAGGTTCCTTGCGCTCTCTGCTGAGAACTAAATTAATTCTATCCTT 3050910 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| || ||| || || ||||||||||| ||||| |||||||| ||||||| || Sbjct 3050911 TAAAGGTCGATCCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATT 3050970 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 110557 ||| || ||| |||||||| | | |||| | ||| | || | | || || || | Sbjct 3050971 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATTCC 3051029 Query 110558 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCT--GGACA 110615 || || || |||| ||||| || || || || | ||||||||||| | ||||| Sbjct 3051030 TGAG---CGTAG---GCCAGGGCAGGTCCCCATTCTTGCTGATGCCCATGTTTTGGGACA 3051083 Query 110616 C 110616 | Sbjct 3051084 C 3051084 >seq4614 Length=4929353 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 110381 GAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCA 110440 ||||||| || || || || || || |||||||| ||| || || || | | | Sbjct 190925 GAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGATCTAAATTAATTCTACCCTTTA 190866 Query 110441 GAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCT 110500 |||| |||||| || || ||||||||||||||||| ||||||| ||||||| |||| Sbjct 190865 AAGGTTGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCT 190806 Query 110501 GCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 | || ||| |||||||| || | ||||| Sbjct 190805 GTTTACCTTCTACTGAAGAGGTTGTGGTCA 190776 >seq7169 Length=1898797 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || || || |||||||| |||| || || || | | | ||||| |||||| || || Sbjct 380095 TTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGGA 380154 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||||||||| ||||||| ||||||| ||||| || ||| Sbjct 380155 ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 380202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406246911587532