Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3359 129 5e-25 seq3414 118 9e-22 seq3144 105 6e-18 seq11879 95.1 1e-14 seq5702 95.1 1e-14 seq3503 95.1 1e-14 seq3192 93.3 4e-14 seq4303 86.0 5e-12 >seq3359 Length=286138 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || | ||||| | || | ||||| | | || Sbjct 33224 CATGCAGATCTTTGTGAAGACCCTCCCGGGCAAAACCATCAACCTTGAGGGCAAGCCCAG 33283 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| |||||| |||||||||||||| || || || ||||| || || Sbjct 33284 TGACACCATTGAGAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 33343 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | |||| ||||||||||| ||||||| | | || | || || ||||| Sbjct 33344 GCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCTGCACTCTCTCAGACTACAA 33403 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || ||||| ||| | || |||| ||||| |||| |||||||| Sbjct 33404 CATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGCAT 33454 >seq3414 Length=2822291 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||||||| | || || ||||| ||||| || Sbjct 171577 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGCCCAGT 171518 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || ||||| ||||||||||| || ||||| || Sbjct 171517 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCCCGACCAG 171458 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || | || || |||||| Sbjct 171457 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTCTCTGACTACAAC 171398 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||||||| | || |||| |||| || |||||||| Sbjct 171397 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 171350 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || |||||||| || Sbjct 171805 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 171746 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || ||||||||||| || ||||| || Sbjct 171745 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCCGACCAG 171686 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| || |||||| Sbjct 171685 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 171626 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || |||| ||||| || | ||||| || Sbjct 171625 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGGTAT 171576 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || ||||| ||||| || Sbjct 172033 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGCCCAGT 171974 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| || || || |||||||| || ||||| || Sbjct 171973 GACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCGACCAG 171914 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| || |||||| Sbjct 171913 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 171854 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||| | || |||| |||| || | ||||| || Sbjct 171853 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGAGGTGGTAT 171804 >seq3144 Length=887747 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | ||||| | || || || |||||| | || | ||||| || || || Sbjct 249518 ATGCAGCTCTTTGTGGAGACCCTCACGGGCAAGACCATCATCCTTGAGGTCGAGCCCAGT 249459 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | | ||||| ||||| ||||||||||||||||| || || ||||| || || Sbjct 249458 TACACCACTGAGAATTTCAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCTGACCAG 249399 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | |||| || ||||| || |||| || | | || | || || |||||| Sbjct 249398 CAGCGTCTGATATTTGCTGGCAAGCAGCTGGAGGATGGCTGCACTCTCTCAGACTACAAC 249339 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAAC 27220 || ||||| |||| ||| | || ||||| ||| ||| |||||||| || Sbjct 249338 ATCCAAAAACAGTCCACCGTGCACCTGGTTCTGCACCTGCAAGGTGGCATTAC 249286 >seq11879 Length=1036973 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || |||||||| || | || Sbjct 346173 ATGCAGATCTTTGTGAAGACACTTACGGGCAAGACCATCACTCTTGAGGTCAAGCCCAGT 346114 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | | |||| |||||| |||||||||||||| || || || ||||| || || Sbjct 346113 GACACCAATGAGGATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 346054 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||| | | ||| ||||||||||| |||| || | || | || || ||| || Sbjct 346053 CAGCATCTGATACTTGCCGGCAAACAGCTGGAGGATGGCCGAACTCTCTCAGACTACGAC 345994 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | ||||| ||| | || |||| ||| |||| |||||||| Sbjct 345993 ATCTGGGAAGAGTCCACCCTGCACCTGGTGCTGCACCTGCGAGGTGGCAT 345944 >seq5702 Length=3466958 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || || ||||| | || || Sbjct 1722466 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGATTGAGCCCAGT 1722407 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGA-AGGCATACCACCCGATCA 27106 ||| | ||| ||| |||||| |||||||||||||| || || || ||||| || || Sbjct 1722406 GACACCATTTAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGGTATCCCACCTGACCA 1722347 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | | ||| || || ||||| |||| || | || | || | ||||| Sbjct 1722346 GCAGCATCTGATACTTGCTGGGAAACAGCTGGAGGATGGCCGCACTCTCTCAGGCTACAA 1722287 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAAC 27220 ||| || || ||||| ||| || | |||| || | |||| |||||||| || Sbjct 1722286 CATCCAGAAAGAGTCCACCCTAAACCTGGTGCTGTGCCTGCGAGGTGGCATTAC 1722233 >seq3503 Length=2845972 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || || || || ||||| || Sbjct 460520 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCCTCG 460461 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || || || || || ||||| || || || ||||| Sbjct 460460 GATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 460401 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| ||||||| | ||| | || || ||||| Sbjct 460400 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGGACTTTGTCTGACTACAAT 460341 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| || | ||| | |||||| | | || ||||| Sbjct 460340 ATTCAAAAGGAGTCTACTCTTCATCTTGTTTTGAGACTTCGTGGTGG 460294 >seq3192 Length=5961771 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||| ||||| || || || || |||||| | || |||| | || ||| Sbjct 5502236 ATGCAGACCTTTGTGAAGACCCTCACAGGCAAGAC-----CT-TTGAGATCGAGCCGAGT 5502289 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | | ||||| ||||| |||||||||||||| || ||||| ||||| || || Sbjct 5502290 GACACCACTGAGAATGTCAACACCAAAATTCAAGACAAGGAGGGCATCCCACCTGACCAG 5502349 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||| | | ||| || |||||||| |||| || | | || | || || |||||| Sbjct 5502350 CAGCATCTGATACTTGCGGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTACAAC 5502409 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAAC 27220 || || || ||||| || | || |||| |||| ||| |||||||| || Sbjct 5502410 ATCCAGAAAGAGTCCACTCTGCACATGGTGCTGCGCCTGCAAGGTGGCATTAC 5502462 >seq4303 Length=4886142 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || || || || ||||| || Sbjct 2814580 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCCTCG 2814639 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || || || || || ||||| || || || ||||| Sbjct 2814640 GATACGATAGAAAATGTAAAGGCCAAGATCCAGGAGAAGGAAGGAATTCCTCCTGATCAG 2814699 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| ||||||| | ||| | || || ||||| Sbjct 2814700 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGGACTTTGTCTGACTACAAT 2814759 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 | |||||||||||| || | ||| | || ||| | | || ||||| Sbjct 2814760 AGTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 2814806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434848698889920