Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3359 95.1 1e-14 seq9489 86.0 5e-12 seq3414 82.4 7e-11 >seq3359 Length=286138 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| |||| | ||| ||||||| || || ||| |||||| || || || || || | Sbjct 33452 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 33393 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175 || || | | || || ||||||||||| |||||||| |||||||||||||| ||||| Sbjct 33392 GAGAGTGCAGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 33333 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | | ||| ||||| ||||| ||||| || | | || || || | || Sbjct 33332 G-ATACCCTCCTTGTCTTGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTTGC 33274 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTACG 39291 | || | |||| |||| |||| || || || |||||||| ||||| ||| || Sbjct 33273 CCTCAAGGTTGATGGTTTTGCCCGGGAGGGTCTTCACAAAGATCTGCATGTTTGCG 33218 >seq9489 Length=9372684 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| |||| | ||| | ||||| || || ||| |||||| || || || || || | Sbjct 432515 GCCACCTCACAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTCTAGTCTGA 432574 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 || | || | || || ||||||||||||||||||| |||| ||||||||| | | Sbjct 432575 GAGACTGCGGCCATCCTCCGGCTGTTTGCCCGCAAATATCAGACACTGCTGGTCAGGCAG 432634 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || || ||||| ||||| ||||| || | || || || | |||||| Sbjct 432635 GATGCCCTACTTGTCTTGGATTTCGGCTTTGACATTCTCAGTGGTGTCCCTGGGCTCCAC 432694 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || | ||||| | || ||| | || || || |||||||| ||||||| Sbjct 432695 CTCAAGGGTGATGGTCTTGCCCATGAGGGTGTTCACAAAGATCTGCATCT 432744 >seq3414 Length=2822291 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | |||| || || || |||||| || || || || || | | Sbjct 171807 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 171866 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| ||||| ||||| || || | ||||||||||| ||| Sbjct 171867 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 171926 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || || || ||| |||||| || | | | | || || || | |||||| Sbjct 171927 ATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 171986 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 || | ||||| | || || ||||| || || || ||||| ||||| || || Sbjct 171987 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTGAC 172039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429478480949573