Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3503 123 2e-23 seq4303 114 9e-21 seq3359 113 3e-20 seq3214 100 2e-16 seq3002 100 2e-16 seq5702 98.7 7e-16 seq3144 98.7 7e-16 seq7746 93.3 3e-14 seq11934 91.5 1e-13 seq5491 91.5 1e-13 seq3414 91.5 1e-13 seq9489 84.2 1e-11 >seq3503 Length=2845972 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| || Sbjct 460523 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 460464 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || || ||||| | || || ||| Sbjct 460463 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 460404 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 460403 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGGACTTTGTCTGACTAC 460344 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || || ||||| ||||| || | ||| | ||||| || Sbjct 460343 AATATTCAAAAGGAGTCTACTCTTCATCTTGTTTTGAG 460306 >seq4303 Length=4886142 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| || Sbjct 2814577 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 2814636 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || || ||||| | || || ||| Sbjct 2814637 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGAGAAGGAAGGAATTCCTCCTGAT 2814696 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 2814697 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGGACTTTGTCTGACTAC 2814756 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || | ||||| ||||| || | ||| | || || || Sbjct 2814757 AATAGTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 2814794 >seq3359 Length=286138 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || |||||| |||| ||||| |||| || || | | || Sbjct 33222 AACATGCAGATCTTTGTGAAGACCCTCCCGGGCAAAACCATCAACCTTGAGGGCAAGCCC 33281 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| |||| | | ||| |||||| ||||| || ||| | || || || Sbjct 33282 AGTGACACCATTGAGAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGAC 33341 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || |||||| | ||||||||||||||||| |||||||| | ||||| | || ||| Sbjct 33342 CAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCTGCACTCTCTCAGACTAC 33401 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || ||||||||||| Sbjct 33402 AACATCCAGAAAGAGTCCAC 33421 >seq3214 Length=3208335 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| | |||||| || || || || ||||| ||||| ||||| || Sbjct 1956678 AAAATGCAGATTTTCGTGATAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 1956737 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | ||| |||| || || | || ||||| | || || | | Sbjct 1956738 TCGGATACGATATAAAATGTAAAGGCCAAGATCCAGGTTAAGGAAGGAATTCCTCCTGGT 1956797 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 | ||| | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 1956798 CGGCAGAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 1956857 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || || ||||||||||| || | ||||| || || || Sbjct 1956858 AATATTCAAAAAGAGTCTACTCTTCATTTTGTGTTGAG 1956895 >seq3002 Length=4620727 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||||| | ||| || || ||||| || || ||||| || Sbjct 2620434 AAAATGCAGATTTTCGTGAAAACCCTAAGGGGGAAGACTATCACCCTTGAGGTTGAACCC 2620375 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| |||| || || || || ||||| | || || ||| Sbjct 2620374 TCAGATACGGCAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 2620315 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||| | ||||||||||||| ||| ||||| || | | Sbjct 2620314 CAGCAAAGACTGATCTTTGCTGGCGAGCAACTGGAAGACGGACGTACTTTGTCTGACTGC 2620255 Query 23788 AACATACAAAAAGAG 23802 ||||| ||||| ||| Sbjct 2620254 AACATTCAAAAGGAG 2620240 >seq5702 Length=3466958 Score = 98.7 bits (108), Expect = 7e-16 Identities = 146/202 (72%), Gaps = 9/202 (4%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||||||||| || || ||||| || || |||| ||| Sbjct 1722466 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGATTGAGCCCAGT 1722407 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGG-TGTACCGCCAGATC 23728 ||||| || | ||| | ||| | |||| || ||||| || || | | || || || | Sbjct 1722406 GACACCATTTAGAATGTCAAAGCCAAAA-TTCAAGACAAGGAGGGGTATCCCACCTGACC 1722348 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT---AGGCGATT 23785 | |||| | | ||| |||| || ||||| ||||| || | |||||| | |||| | Sbjct 1722347 AGCAGCATCTGATACTTGCTGGGAAACAGCTGGAGGATGGCCGCACTCTCTCAGGC---T 1722291 Query 23786 ACAACATACAAAAAGAGTCCAC 23807 ||||||| || ||||||||||| Sbjct 1722290 ACAACATCCAGAAAGAGTCCAC 1722269 >seq3144 Length=887747 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||| | || || | ||||||||||| || || |||| || || || || ||| Sbjct 249518 ATGCAGCTCTTTGTGGAGACCCTCACGGGCAAGACCATCATCCTTGAGGTCGAGCCCAGT 249459 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| ||| | || ||| |||||| |||||||| ||| | || || || || Sbjct 249458 TACACCACTGAGAATTTCAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCTGACCAG 249399 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | |||||||| ||||| || ||||| || | ||||| | || |||||| Sbjct 249398 CAGCGTCTGATATTTGCTGGCAAGCAGCTGGAGGATGGCTGCACTCTCTCAGACTACAAC 249339 Query 23791 ATACAAAAAGAGTCCAC 23807 || |||||| ||||||| Sbjct 249338 ATCCAAAAACAGTCCAC 249322 >seq7746 Length=1950873 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||| | |||||||| ||||||| | | ||||| ||||| ||||| || Sbjct 468322 AAAATGCAGATTTTCATGAAAACCCTTACGGGAAGACC-ATCACCCTCGATGTTGAACCC 468264 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| | || || || ||||| | || || | | Sbjct 468263 TCGGATACGATAGAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGCT 468204 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| | | | ||||| || ||| Sbjct 468203 CAGCAAAGAGGGATCTTTGCTGGCAAGCAACTGGAAGATGCATGGACTTTGTCTGACTAC 468144 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || || ||||| ||||| || | ||| | || || || Sbjct 468143 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 468106 >seq11934 Length=6643911 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||| ||||||||| | |||||||| ||||| || || ||||| ||||| | ||| || Sbjct 5735833 AAAACTCAGATTTTCATGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGCTGAACCC 5735892 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | ||| |||| | || || || ||||| | || || ||| Sbjct 5735893 TCGGATACGATATAAAATGTAAAGGCCGAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 5735952 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 5735953 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 5736012 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || || ||||| ||||| || | ||| | || || || Sbjct 5736013 AATATTCAAAAGGAGTCTACTCTTCATCTCGTGTTGAG 5736050 >seq5491 Length=6255621 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||||| || || || || ||||| ||||| || || ||| Sbjct 1751920 AATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 1751861 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || |||| | | || || ||||| | || || || | Sbjct 1751860 CGACACCATCGAGAATGTCAAGGCAAAGA-TCCAAGATAAGGAAGGCATTCCTCCCGACC 1751802 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || |||||||| || || |||||||| | ||||| | || |||| Sbjct 1751801 AGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACA 1751742 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || ||||||||||| Sbjct 1751741 ACATCCAGAAAGAGTCCAC 1751723 >seq3414 Length=2822291 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || ||||| || || || || ||||| || || || || || Sbjct 172036 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGCCC 171977 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | |||| | || ||||| || || ||||| | || || || Sbjct 171976 AGTGACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCGAC 171917 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | | || ||||| ||||| || |||||||| | |||||| | || ||| Sbjct 171916 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 171857 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || |||||||| || Sbjct 171856 AACATCCAGAAAGAGTCGAC 171837 >seq9489 Length=9372684 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||||| ||| || || ||||| || || || || ||| | Sbjct 432742 ATGCAGATCTTTGTGAACACCCTCATGGGCAAGACCATCACCCTTGAGGTGGAGCCCAGG 432683 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| ||| ||| | ||| | ||| | ||||| | || | | ||| || || Sbjct 432682 GACACCACTGAGAATGTCAAAGCCGAAA-TCCAAGACAAGTAGGGCATCCTGCCTGACCA 432624 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || | |||||||| |||||||| | ||| || | |||| | | || || || Sbjct 432623 GCAGTGTCTGATATTTGCGGGCAAACAGCCGGAGGATGGCCGCAGTCTCTCAGACTAGAA 432564 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 432563 CATCCAGAAAGAGTCCAC 432546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337956783993068