Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12] 12,821 sequences; 3,061,992,840 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7379 140 3e-28 seq8879 109 4e-19 seq4880 102 7e-17 seq3669 93.3 3e-14 seq7169 82.4 6e-11 seq4614 82.4 6e-11 >seq7379 Length=6738282 Score = 140 bits (154), Expect = 3e-28 Identities = 130/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||||||||| || | ||||||||| ||||| || ||| Sbjct 5239852 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCAATGTTGAAAGGC 5239911 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || |||||||| || || |||||||| |||||||| || ||||| | || | Sbjct 5239912 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 5239971 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 || || ||||| || | ||||||||| ||||| || ||||| ||| Sbjct 5239972 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAGA 5240016 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||||||||||||||| || || || || |||| ||| || ||||| ||| ||| Sbjct 5244523 AAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTCCCCTTCTTCTCTGGCGGAGAAC 5244582 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||||||||||||||| ||| || ||||| |||||||| || || ||||| Sbjct 5244583 CCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATCCCAGATTTTCACTCCCTTGGAA 5244642 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || |||||||| | ||||| || || Sbjct 5244643 GACAGCTCTTTAGCATTTGTAGATCC 5244668 >seq8879 Length=1913551 Score = 109 bits (120), Expect = 4e-19 Identities = 188/267 (70%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 770579 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 770520 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 770519 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 770460 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| || | |||| | ||| | || | | | || || || Sbjct 770459 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT-- 770403 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499 || | ||| |||| ||||| || || || || |||||||||||| ||||| || Sbjct 770402 ----CCTGAGCGGTGGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGG-GAC 770348 Query 114500 GCTGCCACGATACCGTTCAG--AATGA 114524 | || ||||| | ||| || ||||| Sbjct 770347 ACAGCGACGATGCAGTTTAGCAAATGA 770321 >seq4880 Length=3737892 Score = 102 bits (112), Expect = 7e-17 Identities = 170/241 (71%), Gaps = 10/241 (4%) Strand=Plus/Minus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || || || |||||||| |||| || | || | | Sbjct 3631568 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 3631509 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| || Sbjct 3631508 TAAAGGTCAATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 3631449 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| || | |||| | ||| | || | | | || || || Sbjct 3631448 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT-- 3631392 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 114498 || | | | |||| ||||| || | ||| || |||||||||||| ||| ||||| Sbjct 3631391 ----CCTGAGCAGTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGGGACA 3631336 Query 114499 C 114499 | Sbjct 3631335 C 3631335 >seq3669 Length=4562161 Score = 93.3 bits (102), Expect = 3e-14 Identities = 167/241 (69%), Gaps = 10/241 (4%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321 ||||||||| || || || || |||| |||||||| |||| || | || || | Sbjct 3050851 ATGAGCTCCTTGTGGAGGTTCCTTGCGCTCTCTGCTGAGAACTAAATTAATTCTATCCTT 3050910 Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381 | ||||| || ||| || || ||||||||||| ||||| |||||||| ||||||| || Sbjct 3050911 TAAAGGTCGATCCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATT 3050970 Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440 ||| |||||| | ||||| | | |||| | ||| | || | | || || || Sbjct 3050971 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATT-- 3051027 Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCT--GGACA 114498 || | || | |||| ||||| || || || || | ||||||||||| | ||||| Sbjct 3051028 ----CCTGAGCGTAGGCCAGGGCAGGTCCCCATTCTTGCTGATGCCCATGTTTTGGGACA 3051083 Query 114499 C 114499 | Sbjct 3051084 C 3051084 >seq7169 Length=1898797 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || || || |||||||| |||| || | || | | | ||||| |||||| || || Sbjct 380095 TTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGGA 380154 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||||||||| ||||||| ||||||| ||||| |||||| Sbjct 380155 ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 380202 >seq4614 Length=4929353 Score = 82.4 bits (90), Expect = 6e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 114264 GAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCA 114323 ||||||| || || || || || || |||||||| ||| || | || | | | Sbjct 190925 GAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGATCTAAATTAATTCTACCCTTTA 190866 Query 114324 GAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCT 114383 |||| |||||| || || ||||||||||||||||| ||||||| ||||||| |||| Sbjct 190865 AAGGTTGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCT 190806 Query 114384 GCTTACCTCTGTCGGAAGACGTAGCGGTCA 114413 | |||||| | ||||| || | ||||| Sbjct 190805 GTTTACCTTCTACTGAAGAGGTTGTGGTCA 190776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406099734588406