Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq7379 140 3e-28
seq8879 109 4e-19
seq4880 102 7e-17
seq3669 93.3 3e-14
seq7169 82.4 6e-11
seq4614 82.4 6e-11
>seq7379
Length=6738282
Score = 140 bits (154), Expect = 3e-28
Identities = 130/165 (79%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||||||||| || | ||||||||| ||||| || |||
Sbjct 5239852 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCAATGTTGAAAGGC 5239911
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || |||||||| || || |||||||| |||||||| || ||||| | || |
Sbjct 5239912 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 5239971
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
|| || ||||| || | ||||||||| ||||| || ||||| |||
Sbjct 5239972 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAGA 5240016
Score = 102 bits (112), Expect = 7e-17
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
||||||||||||||||| || || || || |||| ||| || ||||| ||| |||
Sbjct 5244523 AAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTCCCCTTCTTCTCTGGCGGAGAAC 5244582
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| ||||||||||||||| ||| || ||||| |||||||| || || |||||
Sbjct 5244583 CCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATCCCAGATTTTCACTCCCTTGGAA 5244642
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
|| |||||||| | ||||| || ||
Sbjct 5244643 GACAGCTCTTTAGCATTTGTAGATCC 5244668
>seq8879
Length=1913551
Score = 109 bits (120), Expect = 4e-19
Identities = 188/267 (70%), Gaps = 12/267 (4%)
Strand=Plus/Minus
Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321
||||||||| || || || || || || |||||||| |||| || | || | |
Sbjct 770579 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 770520
Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381
| ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| ||
Sbjct 770519 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 770460
Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440
||| |||||| | ||||| || | |||| | ||| | || | | | || || ||
Sbjct 770459 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT-- 770403
Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 114499
|| | ||| |||| ||||| || || || || |||||||||||| ||||| ||
Sbjct 770402 ----CCTGAGCGGTGGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTGG-GAC 770348
Query 114500 GCTGCCACGATACCGTTCAG--AATGA 114524
| || ||||| | ||| || |||||
Sbjct 770347 ACAGCGACGATGCAGTTTAGCAAATGA 770321
>seq4880
Length=3737892
Score = 102 bits (112), Expect = 7e-17
Identities = 170/241 (71%), Gaps = 10/241 (4%)
Strand=Plus/Minus
Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321
||||||||| || || || || || || |||||||| |||| || | || | |
Sbjct 3631568 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 3631509
Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381
| ||||| |||||| || || ||||||||||||||||| ||||||| ||||||| ||
Sbjct 3631508 TAAAGGTCAATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 3631449
Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440
||| |||||| | ||||| || | |||| | ||| | || | | | || || ||
Sbjct 3631448 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT-- 3631392
Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 114498
|| | | | |||| ||||| || | ||| || |||||||||||| ||| |||||
Sbjct 3631391 ----CCTGAGCAGTGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGGGACA 3631336
Query 114499 C 114499
|
Sbjct 3631335 C 3631335
>seq3669
Length=4562161
Score = 93.3 bits (102), Expect = 3e-14
Identities = 167/241 (69%), Gaps = 10/241 (4%)
Strand=Plus/Plus
Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321
||||||||| || || || || |||| |||||||| |||| || | || || |
Sbjct 3050851 ATGAGCTCCTTGTGGAGGTTCCTTGCGCTCTCTGCTGAGAACTAAATTAATTCTATCCTT 3050910
Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381
| ||||| || ||| || || ||||||||||| ||||| |||||||| ||||||| ||
Sbjct 3050911 TAAAGGTCGATCCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCCATAATCACCAGATT 3050970
Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 114440
||| |||||| | ||||| | | |||| | ||| | || | | || || ||
Sbjct 3050971 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATT-- 3051027
Query 114441 AAAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCT--GGACA 114498
|| | || | |||| ||||| || || || || | ||||||||||| | |||||
Sbjct 3051028 ----CCTGAGCGTAGGCCAGGGCAGGTCCCCATTCTTGCTGATGCCCATGTTTTGGGACA 3051083
Query 114499 C 114499
|
Sbjct 3051084 C 3051084
>seq7169
Length=1898797
Score = 82.4 bits (90), Expect = 6e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| || || |||||||| |||| || | || | | | ||||| |||||| || ||
Sbjct 380095 TTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGGA 380154
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||||||||| ||||||| ||||||| ||||| ||||||
Sbjct 380155 ATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 380202
>seq4614
Length=4929353
Score = 82.4 bits (90), Expect = 6e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 114264 GAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCA 114323
||||||| || || || || || || |||||||| ||| || | || | | |
Sbjct 190925 GAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGATCTAAATTAATTCTACCCTTTA 190866
Query 114324 GAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCT 114383
|||| |||||| || || ||||||||||||||||| ||||||| ||||||| ||||
Sbjct 190865 AAGGTTGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATTCT 190806
Query 114384 GCTTACCTCTGTCGGAAGACGTAGCGGTCA 114413
| |||||| | ||||| || | |||||
Sbjct 190805 GTTTACCTTCTACTGAAGAGGTTGTGGTCA 190776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406099734588406
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |