Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mandrillus_20leucophaeus_20[refseq_20GCF_5F000951045.1_202015-03-12]
12,821 sequences; 3,061,992,840 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq8201 183 4e-41
seq5647 123 4e-23
>seq8201
Length=2345327
Score = 183 bits (202), Expect = 4e-41
Identities = 178/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315
|||||||||| ||||| |||| |||||| ||||| || ||||| || |||||||||||
Sbjct 857436 GTCTGGAACAACTGCTCATCACCCCATTCCGGATGCTCCTGTTTAAGCACATCGCACACT 857495
Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375
||||||||||| | |||||||| ||||| |||||||| || ||||| ||||| |||||
Sbjct 857496 CTGTTGTGTTCTCGCAGCCAGATTGTGGCATACATCATCAGACCAGGCACCAGACCAAAG 857555
Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435
|||| || || ||||| | |||| | || || |||| ||||| |||||||| |
Sbjct 857556 ACCTCCTGCCCCACAGCAAACCGCAGATGCTCAGGGACTTGAGGAGGGTAGATCATCTCT 857615
Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484
|||| |||||||| | ||| |||||||| || || ||||| ||||
Sbjct 857616 GCCTGAGTATCTTTGACTGTGGGAGGATACATCTCTCCATCAATTATCT 857664
Score = 178 bits (196), Expect = 2e-39
Identities = 233/323 (72%), Gaps = 0/323 (0%)
Strand=Plus/Plus
Query 8264 TTGAGGAGCTCCTCATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTA 8323
|||| |||||| ||| ||||| | ||| | | || ||||| ||||| ||||| |
Sbjct 855387 TTGATGAGCTCTGGATCTGGAACACTGAATGAAGTAAAGGGACAGCCCTTCACGTTATTG 855446
Query 8324 CAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAG 8383
|||| ||||||||||| | || | |||| ||| || ||||| ||||| || ||
Sbjct 855447 CAGATGAGAGACTGAATTGAGGCAGTGTTGATGATTTGAAAACCCACTTCTCCACCAAAA 855506
Query 8384 GTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAG 8443
||||| ||||||||||| | || || || || || || |||| || ||||| | ||||
Sbjct 855507 GTGCTTGGCTTCCAGTAGGCAGGAGAACATATAACATTACCCATAAGTCCTTTCAAGGAG 855566
Query 8444 AACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCC 8503
||||| || || | || | ||| ||||||| |||||||| | ||||| ||||||||
Sbjct 855567 AACGGTGCTCCAACTTCTACCATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCT 855626
Query 8504 ACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCG 8563
|||| | | | |||||||||||||| |||| ||| || || || || | ||
Sbjct 855627 ACCAGAAGGGCAGGATACAGCTCCACAGCATCGATGTCACCATAGAGTGCTTCCAACTCT 855686
Query 8564 GCAGCGATCTCCTTTTCTCCTGT 8586
|||| || ||||||||||||||
Sbjct 855687 GCAGACATTTCCTTTTCTCCTGT 855709
Score = 136 bits (150), Expect = 6e-27
Identities = 125/158 (79%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708
|||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | ||
Sbjct 858590 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 858649
Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768
|||||| |||||||| || ||| |||| || |||||||| | ||| ||||||||||||||
Sbjct 858650 AAACTGATGCGTGAAGTGCTGGGCAAAGAATGCAAACATCATGTTTGTGCCCTGGGGATC 858709
Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 9806
|| |||| | || | |||||| |||||||||||
Sbjct 858710 AGGGATGAACTTTCTTCTTAGAAGAAATTTTTCCACAA 858747
Score = 107 bits (118), Expect = 3e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 9906 AGTCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTG 9965
|||||||||| || || | ||||| || || || | ||| || ||||| || || |
Sbjct 859199 AGTCACCTTTCACACCCAAGGGAGTCGGGCAGTCATCAGGCACAGGAGGAAGGGCTCTGG 859258
Query 9966 CGTAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATA 10025
||||||||||| || ||||| |||||||||||| ||| | ||||| || |||||
Sbjct 859259 TATAATAGGAGAGGTTAGAGAAGGCTTCCCAGCTTTTGTAGCCATAGTCAGCATTGTAAG 859318
Query 10026 TGGGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059
| || |||||||||||||||| ||||| ||||
Sbjct 859319 TTGGTGGGCTGTCAATCAAATGTGATCTGGCTGA 859352
Score = 91.5 bits (100), Expect = 2e-13
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003
||||| | ||| || ||||| | ||||| ||||| || | ||||||||| || || |
Sbjct 856843 CTTACCCTGCCAGCAATTTGCCTGGTGAATGATTCAACAAACTGGGTAATTCCATGTTCC 856902
Query 9004 ATGAGTATGGAATTGTTGTAGACGAA--GTTAACGTAGTCATACTTTGTTTTATCAATCT 9061
| | ||| || |||||||||| || ||| | |||| || || | || ||| |
Sbjct 856903 AGTAATATAGAGTTGTTGTAGATAAACTGTTGA--TAGTTGTATTTCTGGTCATGAATTT 856960
Query 9062 CAAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATAC 9121
||| || |||| || | |||||||||||| | |||||||||| | | ||||
Sbjct 856961 GAAAGTTGTCAGGCAGAAGGGGATGCCAGTGATAGAGGGTGTTAAACTCAGCAGCAATAC 857020
Query 9122 GATTTTGGTACTGGAA 9137
||||||||||||||||
Sbjct 857021 GATTTTGGTACTGGAA 857036
>seq5647
Length=3297893
Score = 123 bits (136), Expect = 4e-23
Identities = 169/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
|||||||||| || |||| || ||||| || ||||| |||||||||||| |||| |
Sbjct 221840 TCTTGACGATGTTAAAGCCCATCTCGCCGCCAAAAGTGCTCGGCTTCCAGTACTCCGGAG 221899
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
| |||||| ||| | | ||| || |||||||| || |||||||| | ||| | || |
Sbjct 221900 AACAGATGGGATTCCCTAGGAGACCCTTGAGGGAAAAGGGAGCCCCAATCTCTATCATAC 221959
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528
|||| || ||||| | ||| ||| || |||||| | | | || | ||| | |||||
Sbjct 221960 TCTCCCCAAAGATAGAGTTTGGATGGCACTTTTCAAGAAGCAGCCCAGGGTAGAACTCCA 222019
Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| || | |||||| || || || | || || || |||||||| ||||||
Sbjct 222020 ACGCGTCAATGTCTCCATACAGCTCCTCCAACTCCGCTGCCATCTCCTTCTCTCCT 222075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716761911531840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |